RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ZNF816-ZNF321PA0A0X1KG74 233 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 MRPL33O75394 65 aaKnown RBP16.88■□□□□ 0.29
COL13A1-201ENST00000354547 OMGP23515 440 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 LIAT1Q6ZQX7 453 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 TMEM105Q8N8V8 129 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 CCDC54Q8NEL0 328 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 OR56B2PQ8NGI1 322 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 DECR2Q9NUI1 292 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 PARPBPQ9NWS1 579 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 E5RGE8 158 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 GPM6AP51674 278 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 F2RL1P55085 397 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 RBM11P57052 281 aaKnown RBP16.88■□□□□ 0.29
COL13A1-201ENST00000354547 DCAF12Q5T6F0 453 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 RAB11FIP2Q7L804 512 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 SLC35G3Q8N808 338 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 RXFP4Q8TDU9 374 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 CT55Q8WUE5 264 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 NSG2Q9Y328 171 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 BCL3P20749 454 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 HAAOP46952 286 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 ARF1P84077 181 aaKnown RBP16.88■□□□□ 0.29
COL13A1-201ENST00000354547 TMEM42Q69YG0 159 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 THOC3Q96J01 351 aaKnown RBP16.88■□□□□ 0.29
COL13A1-201ENST00000354547 ADGRG7Q96K78 797 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 EIF5A2Q9GZV4 153 aaKnown RBP16.88■□□□□ 0.29
COL13A1-201ENST00000354547 MAGT1Q9H0U3 335 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 SLC7A10Q9NS82 523 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 ZFP57Q9NU63 452 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 LRFN1Q9P244 771 aa16.88■□□□□ 0.29
COL13A1-201ENST00000354547 RCL1Q9Y2P8 373 aaKnown RBP16.88■□□□□ 0.29
COL13A1-201ENST00000354547 C5orf49A4QMS7 147 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 CRYBA1P05813 215 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 FUT3P21217 361 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 PCBD1P61457 104 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 TRA2AQ13595 282 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL13A1-201ENST00000354547 CLINT1Q14677 625 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 SYT3Q9BQG1 590 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 R4GN57 208 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 FAM166BA8MTA8 275 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 TERTO14746 1132 aaKnown RBP16.87■□□□□ 0.29
COL13A1-201ENST00000354547 CAMLGP49069 296 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 LGI3Q8N145 548 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 MSI2Q96DH6 328 aaKnown RBP16.87■□□□□ 0.29
COL13A1-201ENST00000354547 PLEKHA2Q9HB19 425 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 ZDHHC8Q9ULC8 765 aa16.87■□□□□ 0.29
COL13A1-201ENST00000354547 SPP1P10451 314 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 PEA15Q15121 130 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 CDX2Q99626 313 aaPredicted RBP16.86■□□□□ 0.29
COL13A1-201ENST00000354547 PARP11Q9NR21 331 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 STARD10Q9Y365 291 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 CER1O95813 267 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 PPYP01298 95 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 TUSC5Q8IXB3 177 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 EXTL1Q92935 676 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 FAM212BQ9NTI7 297 aaPredicted RBP16.86■□□□□ 0.29
COL13A1-201ENST00000354547 LOXL2Q9Y4K0 774 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 DNPH1O43598 174 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 KCNJ3P48549 501 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 TSC22D1Q15714 1073 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 ABLIM2Q6H8Q1 611 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 ASCL4Q6XD76 172 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 NTNG2Q96CW9 530 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 GALNT14Q96FL9 552 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 SUCNR1Q9BXA5 334 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 RPS10P5Q9NQ39 176 aa16.86■□□□□ 0.29
COL13A1-201ENST00000354547 FBXO9Q9UK97 447 aaPredicted RBP16.86■□□□□ 0.29
COL13A1-201ENST00000354547 NKX2-6A6NCS4 301 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 ST8SIA3O43173 380 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 GAPDHP04406 335 aaKnown RBP16.85■□□□□ 0.29
COL13A1-201ENST00000354547 CD5P06127 495 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 DAOP14920 347 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 ITGA3P26006 1051 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 IGFBP7Q16270 282 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 LINC00518Q8N0U6 118 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 UBAC2Q8NBM4 344 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 MOB3AQ96BX8 217 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 UBE2J1Q9Y385 318 aaPredicted RBP16.85■□□□□ 0.29
COL13A1-201ENST00000354547 BORCS7-ASMTA0A0B4J1R7 106 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 FAM24AA6NFZ4 105 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 TNFSF12O43508 249 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 SNRNP70P08621 437 aaKnown RBP16.85■□□□□ 0.29
COL13A1-201ENST00000354547 MMP7P09237 267 aaPredicted RBP16.85■□□□□ 0.29
COL13A1-201ENST00000354547 SCTP09683 121 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 TGIF1Q15583 401 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 OR8B8Q15620 311 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 C3AR1Q16581 482 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 C18orf12Q96KH6 178 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 PLA2G3Q9NZ20 509 aa16.85■□□□□ 0.29
COL13A1-201ENST00000354547 H7C1Q1 480 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 YKT6O15498 198 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 DVL1P1P54792 670 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-201ENST00000354547 DAZAP2Q15038 168 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-201ENST00000354547 C6orf15Q6UXA7 325 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-201ENST00000354547 TMEM182Q6ZP80 229 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-201ENST00000354547 VASH2Q86V25 355 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 WDR5BQ86VZ2 330 aa16.84■□□□□ 0.29
COL13A1-201ENST00000354547 CPNE4Q96A23 557 aaPredicted RBP16.84■□□□□ 0.29
COL13A1-201ENST00000354547 SIGLEC12Q96PQ1 595 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms