RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 DKK4Q9UBT3 224 aa13.18□□□□□ -0.3
TUFT1-201ENST00000353024 A0A1B0GW55 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 KANTRA0A1W2PQU2 76 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 IFNA2P01563 188 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 LYL1P12980 280 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 CA6P23280 308 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 IDH3GP51553 393 aaPredicted RBP13.17□□□□□ -0.3
TUFT1-201ENST00000353024 UBE2NP61088 152 aaKnown RBP13.17□□□□□ -0.3
TUFT1-201ENST00000353024 IL24Q13007 206 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
TUFT1-201ENST00000353024 INO80CQ6PI98 192 aaPredicted RBP13.17□□□□□ -0.3
TUFT1-201ENST00000353024 WDR31Q8NA23 367 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DMRTA2Q96SC8 542 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 PKIBQ9C010 78 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 SLC25A32Q9H2D1 315 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 FRYQ5TBA9 3013 aa13.17□□□□□ -0.3
TUFT1-201ENST00000353024 CACNA1GO43497 2377 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 BCL2L11O43521 198 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 RLN2P04090 185 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ZNF728P0DKX0 622 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
TUFT1-201ENST00000353024 SPINK2P20155 84 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 FCGR2CP31995 323 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 FOXF2Q12947 444 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ZNF169Q14929 603 aaPredicted RBP13.16□□□□□ -0.3
TUFT1-201ENST00000353024 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 IGFBP7Q16270 282 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ZNF573Q86YE8 665 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 INO80EQ8NBZ0 244 aaPredicted RBP13.16□□□□□ -0.3
TUFT1-201ENST00000353024 MOB3AQ96BX8 217 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ZNF488Q96MN9 340 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 Q9N2K0 584 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 AHRRA9YTQ3 701 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 I3L521 148 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 SPDEFO95238 335 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 UCP3P55916 312 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ERVS71-1P61550 626 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 PPP1CBP62140 327 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
TUFT1-201ENST00000353024 FAM76BQ5HYJ3 339 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 WDR86Q86TI4 376 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 SGPP2Q8IWX5 399 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ZADH2Q8N4Q0 377 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 CNEP1R1Q8N9A8 125 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 ST8SIA2Q92186 375 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 RBPMSQ93062 196 aaKnown RBP13.16□□□□□ -0.3
TUFT1-201ENST00000353024 PIK3IP1Q96FE7 263 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 C2orf50Q96LR7 162 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 OR2J1Q9GZK6 312 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 PLSCR4Q9NRQ2 329 aa13.16□□□□□ -0.3
TUFT1-201ENST00000353024 KCNAB3O43448 404 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 CBR1P16152 277 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 PIGPP57054 158 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 BEX5Q5H9J7 111 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 PDZD9Q8IXQ8 264 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 TOMM40LQ969M1 308 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 PLK3Q9H4B4 646 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 C1orf123Q9NWV4 160 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 PFDN2Q9UHV9 154 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 SHANK1Q9Y566 2161 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 RHBDL1O75783 438 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 TNFSF13O75888 250 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 IGKV3-15P01624 115 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 HOXB5P09067 269 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 PRKACAP17612 351 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 DUSP1P28562 367 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 RBMXP38159 391 aaKnown RBP13.15□□□□□ -0.3
TUFT1-201ENST00000353024 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
TUFT1-201ENST00000353024 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 C5orf24Q7Z6I8 188 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 LINC00596Q86U02 117 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 C1orf162Q8NEQ5 155 aaPredicted RBP13.15□□□□□ -0.3
TUFT1-201ENST00000353024 RRNAD1Q96FB5 475 aaKnown RBP13.15□□□□□ -0.3
TUFT1-201ENST00000353024 GALNT14Q96FL9 552 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 CCDC120Q96HB5 630 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 REG4Q9BYZ8 158 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 METTL8Q9H825 291 aaKnown RBP13.15□□□□□ -0.3
TUFT1-201ENST00000353024 CDH20Q9HBT6 801 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 SESN1Q9Y6P5 492 aa13.15□□□□□ -0.3
TUFT1-201ENST00000353024 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
TUFT1-201ENST00000353024 MFSD2BA6NFX1 497 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 J3QT63 122 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 CGAP01215 116 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 AADACP22760 399 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 UCP2P55851 309 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 OR2A2Q6IF42 318 aa13.14□□□□□ -0.31
TUFT1-201ENST00000353024 PRSS54Q6PEW0 395 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms