RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 E5RGE8 158 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 TPD52L2O43399 206 aaKnown RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 MBPP02686 304 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 TMEM33P57088 247 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 SRSF3P84103 164 aaKnown RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 PRDX4Q13162 271 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 SRSF7Q16629 238 aaKnown RBP eCLIP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 PUSL1Q8N0Z8 303 aaKnown RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 LGI3Q8N145 548 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 CCDC71LQ8N9Z2 235 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 HPSE2Q8WWQ2 592 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 APOBEC3DQ96AK3 386 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 FGF23Q9GZV9 251 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-201ENST00000351487 NSG2Q9Y328 171 aa19.05■□□□□ 0.64
UPF3A-201ENST00000351487 PRSS44E7EML9 344 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 GPR31O00270 319 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 HLA-HP01893 362 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 HERV-K104P61576 105 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 TMEM164Q5U3C3 297 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 C9orf135Q5VTT2 229 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 CLRN3Q8NCR9 226 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 ZFP57Q9NU63 452 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 C5orf49A4QMS7 147 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 FAM166BA8MTA8 275 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 PPYP01298 95 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 AADACP22760 399 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 FOXG1P55316 489 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-201ENST00000351487 FGF12P61328 243 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 LYZL2Q7Z4W2 148 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 TMEM251Q8N6I4 163 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 OR5L1Q8NGL2 311 aa19.04■□□□□ 0.64
UPF3A-201ENST00000351487 ZNF503-AS2A6NEH8 195 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 SCGB1D2O95969 90 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 CTRB1P17538 263 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 LPAR6P43657 344 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 CAV2P51636 162 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 ZNF169Q14929 603 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-201ENST00000351487 GUCA2BQ16661 112 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 CEACAM21Q3KPI0 293 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 CTRB2Q6GPI1 263 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 MRPL21Q7Z2W9 205 aaKnown RBP19.03■□□□□ 0.64
UPF3A-201ENST00000351487 ZDHHC23Q8IYP9 409 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 UBAC2Q8NBM4 344 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 OR5T2Q8NGG2 359 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 EXTL1Q92935 676 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 PRRG4Q9BZD6 226 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 RCC2Q9P258 522 aaKnown RBP19.03■□□□□ 0.64
UPF3A-201ENST00000351487 COL6A3P12111 3177 aa19.03■□□□□ 0.64
UPF3A-201ENST00000351487 BCL3P20749 454 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 CCNOP22674 350 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 ITGA3P26006 1051 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 BLOC1S1P78537 153 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 OR11L1Q8NGX0 322 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 APH1AQ96BI3 265 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 SEC11CQ9BY50 192 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 HRH4Q9H3N8 390 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 UQCC1Q9NVA1 299 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 FAM86C1Q9NVL1 165 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 CRIM1Q9NZV1 1036 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 PURGQ9UJV8 347 aaKnown RBP19.02■□□□□ 0.64
UPF3A-201ENST00000351487 ARHGAP21Q5T5U3 1957 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 F8W036 122 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 MED6O75586 246 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 DUSP1P28562 367 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 FAM122CQ6P4D5 195 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 FAM185AQ8N0U4 392 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 SLAMF9Q96A28 289 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 ARV1Q9H2C2 271 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 RHOFQ9HBH0 211 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 PARP11Q9NR21 331 aa19.02■□□□□ 0.64
UPF3A-201ENST00000351487 FBXO9Q9UK97 447 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-201ENST00000351487 NAPSAO96009 420 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 CCL2P13500 99 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 CD59P13987 128 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 ARR3P36575 388 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 HAAOP46952 286 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 SPAG16Q8N0X2 631 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 OPA3Q9H6K4 179 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 TMED3Q9Y3Q3 217 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 ZNF407Q9C0G0 2248 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 NME2P22392 152 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 GPM6AP51674 278 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 MPV17LQ2QL34 196 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 BTNL8Q6UX41 500 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 ERGIC1Q969X5 290 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 POM121L2Q96KW2 1035 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 TREM1Q9NP99 234 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 PLA2G3Q9NZ20 509 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 PLA2G2EQ9NZK7 142 aa19.01■□□□□ 0.63
UPF3A-201ENST00000351487 DNAJC13O75165 2243 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 PHF1O43189 567 aaPredicted RBP19■□□□□ 0.63
UPF3A-201ENST00000351487 IL13RA2Q14627 380 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 RNPS1Q15287 305 aaKnown RBP19■□□□□ 0.63
UPF3A-201ENST00000351487 IGSF11Q5DX21 431 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 GPR157Q5UAW9 335 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 LDLRAD3Q86YD5 345 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 BATF2Q8N1L9 274 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 NRIP2Q9BQI9 281 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 TLNRD1Q9H1K6 362 aa19■□□□□ 0.63
UPF3A-201ENST00000351487 Q9N2K0 584 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms