RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
CDC42-202ENST00000344548 KDF1Q8NAX2 398 aaPredicted RBP11.5□□□□□ -0.57
CDC42-202ENST00000344548 NRIP2Q9BQI9 281 aa11.5□□□□□ -0.57
CDC42-202ENST00000344548 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
CDC42-202ENST00000344548 C5orf66Q9H5L9 145 aa11.5□□□□□ -0.57
CDC42-202ENST00000344548 PCDHB16Q9NRJ7 776 aa11.5□□□□□ -0.57
CDC42-202ENST00000344548 PIPOXQ9P0Z9 390 aa11.5□□□□□ -0.57
CDC42-202ENST00000344548 OSGIN2Q9Y236 505 aa11.5□□□□□ -0.57
CDC42-202ENST00000344548 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 SNRPGP15A8MWD9 76 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 PGA5P0DJD9 388 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 DHRS2Q13268 280 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 PPP1R1AQ13522 171 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 CHRFAM7AQ494W8 412 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
CDC42-202ENST00000344548 Q6P435 159 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 ARRDC1Q8N5I2 433 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 SUMF2Q8NBJ7 301 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 TMEM230Q96A57 120 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 CHIAQ9BZP6 476 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 PPA2Q9H2U2 334 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 MGAT4CQ9UBM8 478 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 DIDO1Q9BTC0 2240 aaKnown RBP11.49□□□□□ -0.57
CDC42-202ENST00000344548 GSTT2P0CG29 244 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 ZNF250P15622 560 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 GZMKP49863 264 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 H2BFSP57053 126 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 LIN54Q6MZP7 749 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 NLRC3Q7RTR2 1065 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 ZNF486Q96H40 463 aaPredicted RBP11.49□□□□□ -0.57
CDC42-202ENST00000344548 DLL4Q9NR61 685 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 ELOVL5Q9NYP7 299 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
CDC42-202ENST00000344548 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A10PA6NDY2 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A18PA6NE21 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A16PA6NEW6 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A20PA6NIJ5 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A8PA6NJQ4 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A7PA6NKC0 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A22PA8MWA6 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A12PA8MX19 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A5PA8MXJ8 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A23PA8MXZ1 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 SLC34A2O95436 690 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A15PP0C7V4 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A13PP0C7W8 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A14PP0C7W9 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 FAM90A24PP0C7X0 464 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 AKR1C4P17516 323 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 DTYMKP23919 212 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
CDC42-202ENST00000344548 GLRXP35754 106 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 CA7P43166 264 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 IGSF11Q5DX21 431 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 SLC22A25Q6T423 547 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 UNQ6126/PRO20091Q6UXV3 157 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 SLC25A42Q86VD7 318 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 OR2Z1Q8NG97 314 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 ZNF431Q8TF32 576 aaPredicted RBP11.48□□□□□ -0.57
CDC42-202ENST00000344548 WFIKKN1Q96NZ8 548 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 RTBDNQ9BSG5 229 aaPredicted RBP11.48□□□□□ -0.57
CDC42-202ENST00000344548 MRPL37Q9BZE1 423 aaKnown RBP11.48□□□□□ -0.57
CDC42-202ENST00000344548 ZNF436Q9C0F3 470 aaPredicted RBP11.48□□□□□ -0.57
CDC42-202ENST00000344548 C12orf4Q9NQ89 552 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 PRR13Q9NZ81 148 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 NPTNQ9Y639 398 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 ACACBO00763 2458 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 CACNA1DQ01668 2161 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 TRAV39A0A0B4J263 110 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 NAPSAO96009 420 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 C1QBP02746 253 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 ANXA3P12429 323 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 GLRA1P23415 457 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 ZBTB25P24278 435 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 TAS2R46P59540 309 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 IFITM2Q01629 132 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 CDK10Q15131 360 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 MPV17LQ2QL34 196 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 C3orf36Q3SXR2 165 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 ACTBL2Q562R1 376 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 LAMTOR1Q6IAA8 161 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 WDR82Q6UXN9 313 aa11.48□□□□□ -0.57
CDC42-202ENST00000344548 GPN1Q9HCN4 374 aaPredicted RBP11.48□□□□□ -0.57
CDC42-202ENST00000344548 PKDREJQ9NTG1 2253 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 CEACAM18A8MTB9 384 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 SIRPB1O00241 398 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 HLA-AP01891 365 aaKnown RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 SCTP09683 121 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 OR5H8P0DN80 308 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 ZNF44P15621 663 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 ARPC4P59998 168 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 ZMYND11Q15326 602 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 PEG10Q86TG7 708 aaKnown RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 ZDHHC22Q8N966 263 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 ST6GALNAC3Q8NDV1 305 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 OR2AK2Q8NG84 335 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms