RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 RELBQ01201 579 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 CD300EQ496F6 205 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM182Q6ZP80 229 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 DCBLD1Q8N8Z6 715 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 MYOZ3Q8TDC0 251 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 A4GALTQ9NPC4 353 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PLEKHB1Q9UF11 243 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SMIM30A4D0T7 59 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 C2CD4BA6NLJ0 364 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 A8MWV9 139 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 C1QTNF3-AMACRE9PGA6 284 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 LYL1P12980 280 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PDE7AQ13946 482 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 NRN1LQ496H8 165 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 RNF138Q8WVD3 245 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TET3O43151 1660 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV5A0A0B4J249 113 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 KLK8O60259 260 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FPR2P25090 351 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FCGR2CP31995 323 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 CMTM8Q8IZV2 173 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 OR4P4Q8NGL7 312 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM40Q8WWA1 233 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SOCS4Q8WXH5 440 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 AGMATQ9BSE5 352 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BKO60814 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 CLDN11O75508 207 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BJP06899 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SNHG28P0DPA3 235 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BOP23527 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BBP33778 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BDP58876 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BCP62807 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 MESP2Q0VG99 397 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST2H2BEQ16778 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SELENOHQ8IZQ5 122 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST3H2BBQ8N257 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BHQ93079 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BNQ99877 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BMQ99879 126 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SLC17A4Q9Y2C5 497 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PRR14LQ5THK1 2151 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ERI3O43414 337 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 CD5LO43866 347 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TNFRSF1BP20333 461 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PAX2Q02962 417 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PRDX1Q06830 199 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TSPO2Q5TGU0 170 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 OR4C11Q6IEV9 310 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 OR9G4Q8NGQ1 327 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM106BQ9NUM4 274 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 B3GAT1Q9P2W7 334 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 EMCNQ9ULC0 261 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 GPR132Q9UNW8 380 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PREX2Q70Z35 1606 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 OPN1SWP03999 348 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 IGFBP7Q16270 282 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 NDRG1Q92597 394 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 WBP1Q96G27 269 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 LPAR2Q9HBW0 351 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TCRBV5S4A2TA0A5A2 114 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 GNG7O60262 68 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 KBTBD11O94819 623 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FCGR2BP31994 310 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 EMC4Q5J8M3 183 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FAM222BQ8WU58 562 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 MRPL20Q9BYC9 149 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 OARD1Q9Y530 152 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 E5RJQ4 531 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HS3ST1O14792 307 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ADAT1Q9BUB4 502 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 RTN4RQ9BZR6 473 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV9-2A0A087WT02 112 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1B0GWB2 263 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 MOSPD3O75425 235 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 RBP4P02753 201 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 MPC1LP0DKB6 136 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FAHP16930 419 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 RPS15P62841 145 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF506Q5JVG8 444 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS57Q6UWY2 283 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF480Q8WV37 535 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FBXO17Q96EF6 278 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 DHCR7Q9UBM7 475 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PNV4 684 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM150CB9EJG8 249 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 DANCRP0C864 163 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FZD5Q13467 585 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 IHHQ14623 411 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF205O95201 554 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FCGR3AP08637 254 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 Q6AWC8 147 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 AMIGO3Q86WK7 504 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM116Q8NCL8 245 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A43Q8WUT9 341 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 NDUFB2O95178 105 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 GZMBP10144 247 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms