RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 UBE2G2P60604 165 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 OR4F5Q8NH21 305 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 OR4F4Q96R69 305 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 SH3BGRL3Q9H299 93 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 DUSP13Q9UII6 198 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 FER1L5A0AVI2 2057 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 HELZP42694 1942 aaKnown RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 MED13LQ71F56 2210 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 PABPC1L2AQ5JQF8 200 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 LRRC75AQ8NAA5 344 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 IFI44Q8TCB0 444 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 GNPNAT1Q96EK6 184 aaPredicted RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 TVP23CQ96ET8 276 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 THOC3Q96J01 351 aaKnown RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 FAM206AQ9NX38 181 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 OCIAD1Q9NX40 245 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 CHST1O43916 411 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 DFFBO76075 338 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 FSTP19883 344 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 PTGER4P35408 488 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 SKA3Q8IX90 412 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 PLEKHF2Q9H8W4 249 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 BOKQ9UMX3 212 aaPredicted RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 TP53TG5Q9Y2B4 290 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 PKDREJQ9NTG1 2253 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 KLK2P20151 261 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 PPP1CCP36873 323 aaKnown RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF816Q0VGE8 651 aaPredicted RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 IZUMO4Q1ZYL8 232 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 HFEQ30201 348 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 RHBDD2Q6NTF9 364 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 SLC35G3Q8N808 338 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 RFESDQ8TAC1 157 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 ERGIC1Q969X5 290 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 REG4Q9BYZ8 158 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 AKIRIN1Q9H9L7 192 aaPredicted RBP10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
SNRNP48-201ENST00000342415 TERTO14746 1132 aaKnown RBP10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CTSDP07339 412 aaPredicted RBP10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CCL4P13236 92 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 PI4KAP42356 2102 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 DYNLT3P51808 116 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 NXPH1P58417 271 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 SAMD10Q9BYL1 202 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 ARV1Q9H2C2 271 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 PLEKHA3Q9HB20 300 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 UBE2L5PA0A1B0GUS4 154 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 RBFOX3A6NFN3 312 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 H0YIZ8 118 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 PDCD6O75340 191 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 UBE2V2Q15819 145 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 SPSB1Q96BD6 273 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 DEFB127Q9H1M4 99 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CLEC1BQ9P126 229 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 AP4M1O00189 453 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CBR3O75828 277 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CD8AP01732 235 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 FBP1P09467 338 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 FUT6P51993 359 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 TMEM50BP56557 158 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 TBC1D26Q86UD7 250 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 ZNF610Q8N9Z0 462 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 APH1AQ96BI3 265 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 RAB39BQ96DA2 213 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 HEYLQ9NQ87 328 aaPredicted RBP10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CCL28Q9NRJ3 127 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 PLA2G3Q9NZ20 509 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
SNRNP48-201ENST00000342415 CD74P04233 296 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 IGKV3-11P04433 115 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 PSMB3P49720 205 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 TGFBR3Q03167 851 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 CLN3Q13286 438 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 HLA-BQ31612 363 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 TMEM41BQ5BJD5 291 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 GAPTQ8N292 157 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 C15orf54Q8N8G6 183 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 RARRES2Q99969 163 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 AURKAIP1Q9NWT8 199 aaPredicted RBP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 TMED3Q9Y3Q3 217 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 WISP1O95388 367 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 ATP6V0CP27449 155 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 LURAP1Q96LR2 239 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 SLC7A10Q9NS82 523 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 RCC2Q9P258 522 aaKnown RBP10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 SH3BGRL2Q9UJC5 107 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 HSF4Q9ULV5 492 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 C5orf42Q9H799 3197 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 MFNGO00587 321 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 GDF9O60383 454 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 PPYP01298 95 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 HKR1P10072 659 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 EDDM3BP56851 147 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 RAB1AP62820 205 aa10.87□□□□□ -0.67
SNRNP48-201ENST00000342415 MSMO1Q15800 293 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms