RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ATP5SQ99766 215 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 PCGF1Q9BSM1 259 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 TM2D1Q9BX74 207 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 NKX2-4Q9H2Z4 354 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 OR51I2Q9H344 312 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 PLSCR2Q9NRY7 297 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 TMEM106BQ9NUM4 274 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ZFP92A6NM28 416 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 CCL25O15444 150 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 CIDEAO60543 219 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 DXOO77932 396 aaKnown RBP16.15■□□□□ 0.18
SMPD1-201ENST00000342245 GNB2P62879 340 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 CBLN3Q6UW01 205 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 OR2V1Q8NHB1 315 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 SPPL3Q8TCT6 385 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 VAMP8Q9BV40 100 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 RFNGQ9Y644 331 aa16.15■□□□□ 0.18
SMPD1-201ENST00000342245 YPEL1O60688 119 aa16.14■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF133P52736 654 aaPredicted RBP16.14■□□□□ 0.18
SMPD1-201ENST00000342245 NOGQ13253 232 aa16.14■□□□□ 0.18
SMPD1-201ENST00000342245 OGFOD3Q6PK18 319 aa16.14■□□□□ 0.18
SMPD1-201ENST00000342245 TOMM20LQ6UXN7 152 aa16.14■□□□□ 0.18
SMPD1-201ENST00000342245 SDSLQ96GA7 329 aa16.14■□□□□ 0.18
SMPD1-201ENST00000342245 YPEL2Q96QA6 119 aa16.14■□□□□ 0.18
SMPD1-201ENST00000342245 PTRH2Q9Y3E5 179 aaKnown RBP16.14■□□□□ 0.18
SMPD1-201ENST00000342245 TRPM6Q9BX84 2022 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 SYNGR4O95473 234 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 CD55P08174 381 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 DYNLT3P51808 116 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 OR8G2PQ6IF36 304 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 TMEFF1Q8IYR6 380 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 SLC38A9Q8NBW4 561 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 SMIM7Q9BQ49 75 aa16.14■□□□□ 0.17
SMPD1-201ENST00000342245 TMEM238LA0A1B0GVL6 79 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 MSTNO14793 375 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 MPZL1O95297 269 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 CISD3P0C7P0 127 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 EPHA8P29322 1005 aaPredicted RBP16.13■□□□□ 0.17
SMPD1-201ENST00000342245 MPV17LQ2QL34 196 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 GATSQ8NAP1 163 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 ALKBH3Q96Q83 286 aaPredicted RBP16.13■□□□□ 0.17
SMPD1-201ENST00000342245 CACNA1CQ13936 2221 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 CLEC18AA5D8T8 446 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 KBTBD11O94819 623 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 SEMA4FO95754 770 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 TOMM40O96008 361 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 P2RY2P41231 377 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 TFPI2P48307 235 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 UCP3P55916 312 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 TPPP2P59282 170 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 UBE2V1Q13404 147 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 CD226Q15762 336 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 CLEC18CQ8NCF0 446 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 OR10S1Q8NGN2 331 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 DDIT4LQ96D03 193 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 REEP6Q96HR9 211 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 ZFYVE21Q9BQ24 234 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 CLDN16Q9Y5I7 305 aa16.13■□□□□ 0.17
SMPD1-201ENST00000342245 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 PROB1E7EW31 1015 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 IFNA5P01569 189 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 TCN2P20062 427 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 LINC00346Q8IVM7 164 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 FGF14Q92915 247 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 SLAMF6Q96DU3 332 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 SPACA5Q96QH8 159 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 GABRG3Q99928 467 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 ALKBH7Q9BT30 221 aaPredicted RBP16.12■□□□□ 0.17
SMPD1-201ENST00000342245 FOXQ1Q9C009 403 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
SMPD1-201ENST00000342245 A0A1W2PP11 408 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 HSBP1L1C9JCN9 74 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 CEACAM8P31997 349 aaPredicted RBP16.12■□□□□ 0.17
SMPD1-201ENST00000342245 FIGLAQ6QHK4 219 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 NECAP1Q8NC96 275 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 SSC4DQ8WTU2 575 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 VWCEQ96DN2 955 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 WWTR1Q9GZV5 400 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 TMEM9BQ9NQ34 198 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 SLC2A9Q9NRM0 540 aa16.12■□□□□ 0.17
SMPD1-201ENST00000342245 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMPD1-201ENST00000342245 MRPS2Q9Y399 296 aaKnown RBP16.12■□□□□ 0.17
SMPD1-201ENST00000342245 OMGP23515 440 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 PRSS41Q7RTY9 318 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 CORO2AQ92828 525 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 TOMM40LQ969M1 308 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 DNAJA3Q96EY1 480 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 CIB3Q96Q77 187 aaPredicted RBP16.11■□□□□ 0.17
SMPD1-201ENST00000342245 CEBPZOSA8MTT3 80 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 WNT5AP41221 380 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 DEFB103AP81534 67 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 PDGFRLQ15198 375 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 C9orf50Q5SZB4 431 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 TPTE2P1Q5T6R2 138 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 NUDT10Q8NFP7 164 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 OR4B1Q8NGF8 309 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 OR51E1Q8TCB6 317 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 GLRX2Q9NS18 164 aa16.11■□□□□ 0.17
SMPD1-201ENST00000342245 H0YGG7 62 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms