RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 NSMCE2Q96MF7 247 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 RBFOX1Q9NWB1 397 aaKnown RBP12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 MAGEL2Q9UJ55 1249 aa12.76□□□□□ -0.37
NECTIN1-202ENST00000340882 A0A087X0M5 115 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 A0A1B0GX30 115 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 OOSP1A8MZH6 123 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 SIRPB1O00241 398 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 CCRL2O00421 344 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 SPNP16150 400 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 SLC2A5P22732 501 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 AESQ08117 197 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 GPR50Q13585 617 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 C17orf58Q2M2W7 97 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 SLX4IPQ5VYV7 408 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 FAM53AQ6NSI3 398 aaPredicted RBP12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 DEGS2Q6QHC5 323 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 PLEKHG7Q6ZR37 379 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 CPOQ8IVL8 374 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 RNFT2Q96EX2 444 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 GAL3ST2Q9H3Q3 398 aa12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 SEBOXQ9HB31 216 aaPredicted RBP12.75□□□□□ -0.37
NECTIN1-202ENST00000340882 TRGV10A0A0A0MS01 117 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 H3BSH0 61 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 ENTPD6O75354 484 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 IGKV1D-33P01593 117 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 IGKV1-33P01594 117 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 MRPL3P09001 348 aaKnown RBP12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 BCL3P20749 454 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 GPR12P47775 334 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 PRRX1P54821 245 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 ROM1Q03395 351 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 FOXE3Q13461 319 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 MICAQ29983 383 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 Q6ZSR3 168 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 TEX47Q8TBZ9 253 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 LEAP2Q969E1 77 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 RPEQ96AT9 228 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 CREB3L1Q96BA8 519 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 MROQ9BYG7 248 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 TAS2R3Q9NYW6 316 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 GTF2A1LQ9UNN4 478 aa12.74□□□□□ -0.37
NECTIN1-202ENST00000340882 H3BN98 237 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 AP4M1O00189 453 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 PRODHO43272 600 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 HSD17B1P14061 328 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 CFHR3Q02985 330 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 KPNB1Q14974 876 aaKnown RBP12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 ZNF679Q8IYX0 411 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 ELMOD2Q8IZ81 293 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 RBMXL1Q96E39 390 aaKnown RBP12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 YIPF3Q9GZM5 350 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 ING3Q9NXR8 418 aa12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.73□□□□□ -0.37
NECTIN1-202ENST00000340882 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 SASH3O75995 380 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 NFYBP25208 207 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 MAGEA2P43356 314 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 VEGFCP49767 419 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 INSL3P51460 131 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 RIDAP52758 137 aaKnown RBP12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 RPS7P62081 194 aaKnown RBP12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 GINS1Q14691 196 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 ZNF146Q15072 292 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 ZNF829Q3KNS6 432 aaPredicted RBP12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 CD300LDQ6UXZ3 194 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 FAM58AQ8N1B3 248 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 COQ2Q96H96 371 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 ISYNA1Q9NPH2 558 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 OR52A1Q9UKL2 312 aa12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
NECTIN1-202ENST00000340882 CCDC182A6NF36 153 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 ZNF254O75437 659 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 OR2H2O95918 312 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 ELANEP08246 267 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 GP9P14770 177 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 PRKACAP17612 351 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 PTGFRP43088 359 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 APOFQ13790 326 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 ODF4Q2M2E3 257 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 SLC35D3Q5M8T2 416 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 BCL2L15Q5TBC7 163 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 Q8N9W7 124 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 OR4D6Q8NGJ1 314 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 OR9G1Q8NH87 305 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 KIRREL1Q96J84 757 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 ABCG5Q9H222 651 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 GNB4Q9HAV0 340 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 IKZF2Q9UKS7 526 aa12.71□□□□□ -0.37
NECTIN1-202ENST00000340882 IGHV3-72A0A0B4J1Y9 119 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 TRBV2A0A0J9YWF9 115 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 ODAMA1E959 279 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 J3QR06 171 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms