RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 RPL22L1Q6P5R6 122 aaKnown RBP10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 OR13C9Q8NGT0 318 aa10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 TSEN15Q8WW01 171 aaKnown RBP10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 CYGBQ8WWM9 190 aa10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 BEX1Q9HBH7 125 aa10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 DIMT1Q9UNQ2 313 aaKnown RBP10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 EXOSC1Q9Y3B2 195 aaKnown RBP10.9□□□□□ -0.66
SIRPB3P-201ENST00000340424 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 CCDC160A6NGH7 325 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 F8VVB4 439 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 F8VWA3 439 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 ANGPTL7O43827 346 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 KDM4BO94953 1096 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 CD2P06729 351 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 RAG2P55895 527 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 KLRD1Q13241 179 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 AANATQ16613 207 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 SMN1Q16637 294 aaKnown RBP10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 BEND2Q8NDZ0 799 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 CNIH3Q8TBE1 160 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 RPS4Y2Q8TD47 263 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 GPR148Q8TDV2 347 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 PDCD1LG2Q9BQ51 273 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 HMG20AQ9NP66 347 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 RBFOX1Q9NWB1 397 aaKnown RBP10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 CHCHD3Q9NX63 227 aaKnown RBP10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 VPREB3Q9UKI3 123 aa10.89□□□□□ -0.67
SIRPB3P-201ENST00000340424 A0A1B0GVG6 124 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 C17orf98A8MV24 154 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 SH2D1BO14796 132 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 MGST3O14880 152 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 MAGEB3O15480 346 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 GPR137BO60478 399 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 HCKP08631 526 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 GNAO1P09471 354 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 PIPP12273 146 aaPredicted RBP10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 PRKACAP17612 351 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 BCL3P20749 454 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 GABRR1P24046 479 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 NPBWR2P48146 333 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 EDDM3BP56851 147 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 GABARAPL2P60520 117 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 ZNF273Q14593 569 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 CDK5R1Q15078 307 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 RBM48Q5RL73 367 aaKnown RBP10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 HCP5Q6MZN7 132 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 ZNF773Q6PK81 442 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 C17orf107Q6ZR85 190 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 C11orf42Q8N5U0 333 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 CHST4Q8NCG5 386 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 OR4M1Q8NGD0 313 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 OR52N1Q8NH53 320 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 ISOC1Q96CN7 298 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 ZNF714Q96N38 554 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 TNFRSF19Q9NS68 423 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 C1RLQ9NZP8 487 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 LINC00312Q9Y6C7 94 aa10.88□□□□□ -0.67
SIRPB3P-201ENST00000340424 TMEM82A0PJX8 343 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 FUOMA2VDF0 154 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 EFCAB10A6NFE3 127 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 E9PI62 339 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 LCE2BO14633 110 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 SPRY1O43609 319 aaPredicted RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 CLIC3O95833 236 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 CCL3L1P16619 93 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 RAB3AP20336 220 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 MDKP21741 143 aaPredicted RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 ERP29P30040 261 aaKnown RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 ETV1P50549 477 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 DLX6P56179 175 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 LGALS4P56470 323 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 KISS1Q15726 138 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 GRK1Q15835 563 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 ZNF529Q6P280 563 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 C8orf59Q8N0T1 100 aaPredicted RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 OR13D1Q8NGV5 346 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 FOXRED1Q96CU9 486 aaPredicted RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 SMIM19Q96E16 107 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 TMEM80Q96HE8 168 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 MEGF9Q9H1U4 602 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 PLGRKTQ9HBL7 147 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 PALMDQ9NP74 551 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 EXOSC4Q9NPD3 245 aaKnown RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 BABAM2Q9NXR7 383 aa10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 CNOT2Q9NZN8 540 aaKnown RBP10.87□□□□□ -0.67
SIRPB3P-201ENST00000340424 A0A1W2PRD5 423 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 A0A1W2PRF3 423 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 A0A1W2PRM7 423 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 OGG1O15527 345 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 INMTO95050 263 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 CSN2P05814 226 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 LMO1P25800 156 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 TGFBR2P37173 567 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 MTNR1BP49286 362 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 TMBIM6P55061 237 aa10.86□□□□□ -0.67
SIRPB3P-201ENST00000340424 DLX1P56177 255 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms