RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 SPDEFO95238 335 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 SFT2D2O95562 160 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 SCTP09683 121 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 DHODHQ02127 395 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 Q6ZS92 163 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 ZNF826PQ6ZT77 177 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 OR5A2Q8NGI9 324 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 RFPL4AA6NLU0 287 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 RFPL4AL1F8VTS6 287 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 BET1O15155 118 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 S100A11P31949 105 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 FGF12P61328 243 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 MPPED2Q15777 294 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 NSUN5P2Q63ZY6 315 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 OR5T2Q8NGG2 359 aa13.18□□□□□ -0.3
MBD1-203ENST00000339998 DBX1A6NMT0 343 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 CECR9P0C854 216 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 CEBPDP49716 269 aaPredicted RBP13.17□□□□□ -0.3
MBD1-203ENST00000339998 MKXQ8IYA7 352 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 TMEM185AQ8NFB2 350 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 KLF14Q8TD94 323 aaPredicted RBP13.17□□□□□ -0.3
MBD1-203ENST00000339998 MSL2Q9HCI7 577 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 C12orf4Q9NQ89 552 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 MBD2Q9UBB5 411 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 CHD3Q12873 2000 aaKnown RBP13.17□□□□□ -0.3
MBD1-203ENST00000339998 CEACAM18A8MTB9 384 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 C22orf34Q6ZV56 151 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 OR5L1Q8NGL2 311 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 MRPS24Q96EL2 167 aaKnown RBP13.17□□□□□ -0.3
MBD1-203ENST00000339998 TECTBQ96PL2 329 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 GLRX2Q9NS18 164 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 RCC1P18754 421 aaPredicted RBP13.17□□□□□ -0.3
MBD1-203ENST00000339998 GNG3P63215 75 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 DMRTA2Q96SC8 542 aa13.17□□□□□ -0.3
MBD1-203ENST00000339998 METTL8Q9H825 291 aaKnown RBP13.17□□□□□ -0.3
MBD1-203ENST00000339998 H0YIZ8 118 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 HOXC12P31275 282 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 PIGPP57054 158 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 OR6K3Q8NGY3 331 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 OR51I2Q9H344 312 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 NECAP2Q9NVZ3 263 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 TP53TG5Q9Y2B4 290 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 TEX13DA0A0J9YY54 714 aaPredicted RBP13.16□□□□□ -0.3
MBD1-203ENST00000339998 RPS10-NUDT3A0A1W2PQS6 291 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 CGAP01215 116 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 CD8AP01732 235 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 AADACP22760 399 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 ZNF154Q13106 437 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 ZNF474Q6S9Z5 364 aaPredicted RBP13.16□□□□□ -0.3
MBD1-203ENST00000339998 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 SCCPDHQ8NBX0 429 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 UFSP2Q9NUQ7 469 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 PROCRQ9UNN8 238 aa13.16□□□□□ -0.3
MBD1-203ENST00000339998 C14orf166Q9Y224 244 aaKnown RBP13.16□□□□□ -0.3
MBD1-203ENST00000339998 TRAV24A0A0B4J272 114 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 HMSDA8MTL9 139 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 AHRRA9YTQ3 701 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 SIRPB1O00241 398 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 WNT9BO14905 357 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 CA11O75493 328 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 COX5AP20674 150 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 FAHD2BQ6P2I3 314 aaPredicted RBP13.15□□□□□ -0.3
MBD1-203ENST00000339998 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
MBD1-203ENST00000339998 COQ8AQ8NI60 647 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 FAHD2AQ96GK7 314 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 ADAT1Q9BUB4 502 aaKnown RBP13.15□□□□□ -0.3
MBD1-203ENST00000339998 PLSCR4Q9NRQ2 329 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 ZNF44P15621 663 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 S100A1P23297 94 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 DTYMKP23919 212 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 TAS2R31P59538 309 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 HERPUD1Q15011 391 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 FAM58AQ8N1B3 248 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 PRR18Q8N4B5 295 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 RELL2Q8NC24 303 aaPredicted RBP13.15□□□□□ -0.3
MBD1-203ENST00000339998 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
MBD1-203ENST00000339998 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 OBP2BQ9NPH6 170 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 MPC1Q9Y5U8 109 aa13.15□□□□□ -0.3
MBD1-203ENST00000339998 MLNRO43193 412 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 ZNF83P51522 516 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 MSMPQ1L6U9 139 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 PRR30Q53SZ7 412 aaPredicted RBP13.14□□□□□ -0.31
MBD1-203ENST00000339998 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 INO80CQ6PI98 192 aaPredicted RBP13.14□□□□□ -0.31
MBD1-203ENST00000339998 RRNAD1Q96FB5 475 aaKnown RBP13.14□□□□□ -0.31
MBD1-203ENST00000339998 UBQLN2Q9UHD9 624 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 ITGB1BP2Q9UKP3 347 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 RLN2P04090 185 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms