RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 NUDT16L1Q9BRJ7 211 aaKnown RBP4.87□□□□□ -1.63
CSDE1-202ENST00000339438 PRORYQ9H606 182 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 TP53TG3Q9ULZ0 132 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 SLC22A13Q9Y226 551 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 WDR45Q9Y484 360 aa4.87□□□□□ -1.63
CSDE1-202ENST00000339438 LRBAP50851 2863 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 MSTNO14793 375 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 TACSTD2P09758 323 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 PVRP15151 417 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 GNB3P16520 340 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 HNF1AP20823 631 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 GLRA1P23415 457 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CCKBRP32239 447 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF117Q03924 483 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 FBXW12Q6X9E4 464 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 LINC01551Q86U37 167 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 OR14L1PQ8NHC6 308 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 WFDC12Q8WWY7 111 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ADAD1Q96M93 576 aaKnown RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ELOVL1Q9BW60 279 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 SDF2L1Q9HCN8 221 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 DECR2Q9NUI1 292 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 NAGKQ9UJ70 344 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 SLC13A4Q9UKG4 626 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 MRPS17Q9Y2R5 130 aaKnown RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 IGKV1D-42A0A075B6H8 117 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 PPP5D1E7EU14 171 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CLDN34H7C241 214 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CIDEAO60543 219 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CHRNB4P30926 498 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 IDH3GP51553 393 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CARD18P57730 90 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CSNK1G2P78368 415 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF92Q03936 586 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 PMS2P11Q13670 270 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 DEFB133Q30KQ1 61 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 MORN2Q502X0 79 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 PLXDC2Q6UX71 529 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF100Q8IYN0 542 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 FAM185AQ8N0U4 392 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF619Q8N2I2 560 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ADPRHL1Q8NDY3 354 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 OR51G1Q8NGK1 321 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 OR2L2Q8NH16 312 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 MFSD8Q8NHS3 518 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 EXTL1Q92935 676 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 FOXI3A8MTJ6 420 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 VSIG8P0DPA2 414 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF43P17038 809 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CCKARP32238 428 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 S100A10P60903 97 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 FOXK1P85037 733 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ARHGAP19Q14CB8 494 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 DEFB110Q30KQ9 67 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 EIPR1Q53HC9 387 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 TGIF2LYQ8IUE0 185 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 LMX1AQ8TE12 382 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 HOXB13Q92826 284 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 TAAR8Q969N4 342 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 KLHDC7BQ96G42 594 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF2Q9BSG1 426 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 NICN1Q9BSH3 213 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 CNTD2Q9H8S5 307 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 P4HTMQ9NXG6 502 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 DNAJB12Q9NXW2 375 aaKnown RBP4.86□□□□□ -1.63
CSDE1-202ENST00000339438 FKBP11Q9NYL4 201 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 FBLN5Q9UBX5 448 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 RP1P56715 2156 aa4.86□□□□□ -1.63
CSDE1-202ENST00000339438 DNAH7Q8WXX0 4024 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 AHCTF1Q8WYP5 2266 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 A0A1B0GUS0 222 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 A0A1B0GV50 99 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 HSPB2A8KAH6 182 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 LILRA1O75019 489 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 DBHP09172 617 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 HIST1H1TP22492 207 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-202ENST00000339438 EMDP50402 254 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 RUNX2Q13950 521 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 FAM53BQ14153 422 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 HSPB2Q16082 182 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 ABHD17CQ6PCB6 329 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM182Q6ZP80 229 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF676Q8N7Q3 588 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM171Q8WVE6 324 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 ZNF524Q96C55 264 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 C8orf44Q96CB5 159 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 SLC35E1Q96K37 410 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 WFIKKN1Q96NZ8 548 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 LRRC61Q9BV99 259 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 RBKSQ9H477 322 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 FUT9Q9Y231 359 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 RNF114Q9Y508 228 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 WSB1Q9Y6I7 421 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 IGHV2-70DA0A0C4DH43 119 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 LOC102723971A0A1B0GUV8 181 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 TMEM14DPA8MWL7 114 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 TNFRSF10CO14798 259 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 CTSVO60911 334 aa4.85□□□□□ -1.63
CSDE1-202ENST00000339438 CLEC3AO75596 197 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms