RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CLEC9AQ6UXN8 241 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 TTTY12Q9BZ98 90 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 SMIM3Q9BZL3 60 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 NKX6-2Q9C056 277 aaPredicted RBP14.06□□□□□ -0.16
LITAF-201ENST00000339430 DOCK7Q96N67 2140 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 ZNF816-ZNF321PA0A0X1KG74 233 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 TMEM218A2RU14 115 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 RAB19A4D1S5 217 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 KLRC4-KLRK1H3BQV0 150 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 GPR31O00270 319 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ADCYAP1P18509 176 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 DTYMKP23919 212 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 TNFSF10P50591 281 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ARF1P84077 181 aaKnown RBP14.05□□□□□ -0.16
LITAF-201ENST00000339430 OR8B8Q15620 311 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ZNF766Q5HY98 468 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 Q6ZPA2 131 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 SLC25A26Q70HW3 274 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ZNF611Q8N823 705 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ARL11Q969Q4 196 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ADAT1Q9BUB4 502 aaKnown RBP14.05□□□□□ -0.16
LITAF-201ENST00000339430 HRH4Q9H3N8 390 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ZNF442Q9H7R0 627 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 ZNF703Q9H7S9 590 aaPredicted RBP14.05□□□□□ -0.16
LITAF-201ENST00000339430 DNAJB11Q9UBS4 358 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 B4GALT7Q9UBV7 327 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 OR7C1O76099 320 aaPredicted RBP14.05□□□□□ -0.16
LITAF-201ENST00000339430 IFNA21P01568 189 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 HLA-HP01893 362 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 RPL12P30050 165 aaKnown RBP14.05□□□□□ -0.16
LITAF-201ENST00000339430 MEOX1P50221 254 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 UQCC3Q6UW78 93 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 DHRS11Q6UWP2 260 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 C5orf24Q7Z6I8 188 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 TUSC5Q8IXB3 177 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 OR5L1Q8NGL2 311 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 OR11L1Q8NGX0 322 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 TSNAXQ99598 290 aaKnown RBP14.05□□□□□ -0.16
LITAF-201ENST00000339430 RGCCQ9H4X1 137 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 TAF9BQ9HBM6 251 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 DECR2Q9NUI1 292 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 CRIM1Q9NZV1 1036 aa14.05□□□□□ -0.16
LITAF-201ENST00000339430 K7EPK0 472 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 XRCC2O43543 280 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 ATG12O94817 140 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 MAGEA5P43359 124 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 PLGLB1Q02325 96 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 MALLQ13021 153 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 STK11Q15831 433 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 GUCA2BQ16661 112 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 PDSS1Q5T2R2 415 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.04□□□□□ -0.16
LITAF-201ENST00000339430 ZNF100Q8IYN0 542 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 FAM71E2Q8N5Q1 922 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 OR4A4PQ8NGN8 299 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
LITAF-201ENST00000339430 ZNF391Q9UJN7 358 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 MRPS18CQ9Y3D5 142 aaKnown RBP14.04□□□□□ -0.16
LITAF-201ENST00000339430 FBXO24O75426 580 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 CEACAM4O75871 244 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 LHX2P50458 406 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 RBM11P57052 281 aaKnown RBP14.04□□□□□ -0.16
LITAF-201ENST00000339430 SMCO1Q147U7 214 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 ZNF169Q14929 603 aaPredicted RBP14.04□□□□□ -0.16
LITAF-201ENST00000339430 MST1LQ2TV78 715 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 LYZL2Q7Z4W2 148 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 SPACA3Q8IXA5 215 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 OR56B2PQ8NGI1 322 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 PAPOLGQ9BWT3 736 aaKnown RBP14.04□□□□□ -0.16
LITAF-201ENST00000339430 C1QTNF5Q9BXJ0 243 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 NAA60Q9H7X0 242 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 TREM1Q9NP99 234 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 LPAR3Q9UBY5 353 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 KCNIP3Q9Y2W7 256 aa14.04□□□□□ -0.16
LITAF-201ENST00000339430 MGAQ8IWI9 3026 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 ZNF503-AS2A6NEH8 195 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 PDCD6O75340 191 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 DEDDO75618 318 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 EIF2S3P41091 472 aaKnown RBP14.03□□□□□ -0.16
LITAF-201ENST00000339430 IGFL2Q6UWQ7 119 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 OR5T2Q8NGG2 359 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 ZNF286AQ9HBT8 521 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 SLC2A9Q9NRM0 540 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 PARPBPQ9NWS1 579 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 ZNF629Q9UEG4 869 aaPredicted RBP14.03□□□□□ -0.16
LITAF-201ENST00000339430 FBXL17Q9UF56 701 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 C5orf49A4QMS7 147 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 DIRAS3O95661 229 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 F12P00748 615 aaPredicted RBP14.03□□□□□ -0.16
LITAF-201ENST00000339430 TMEM187Q14656 261 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 C3AR1Q16581 482 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 TMEM251Q8N6I4 163 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 TMEM178AQ8NBL3 297 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 TUBD1Q9UJT1 453 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 FAM96BQ9Y3D0 163 aa14.03□□□□□ -0.16
LITAF-201ENST00000339430 ATP6V1G2-DDX39BF2Z307 99 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 F8W036 122 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 TPD52L2O43399 206 aaKnown RBP14.02□□□□□ -0.16
LITAF-201ENST00000339430 MED6O75586 246 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms