RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SLC30A7Q8NEW0 376 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 BCL2L2Q92843 193 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SLAMF9Q96A28 289 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 APOBEC3DQ96AK3 386 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SLC5A7Q9GZV3 580 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 DEFB127Q9H1M4 99 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MTCH1Q9NZJ7 389 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 RCC2Q9P258 522 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 PFDN2Q9UHV9 154 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 LAMA5O15230 3695 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ARHGAP21Q5T5U3 1957 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 URB1O60287 2271 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 DOCK7Q96N67 2140 aa11.13□□□□□ -0.63
CDK5RAP1-201ENST00000339269 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FUT3P21217 361 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 NUP62P37198 522 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 GPM6AP51674 278 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 PIGPP57054 158 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SOX8P57073 446 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 NAAAQ02083 359 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 CEACAM21Q3KPI0 293 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 PAN3Q58A45 887 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 IL22RA1Q8N6P7 574 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 OR1K1Q8NGR3 316 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MS4A7Q9GZW8 240 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 GP6Q9HCN6 339 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 COQ3Q9NZJ6 369 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 TUBD1Q9UJT1 453 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 CDRT15L2A8MXV6 281 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 KLRC4-KLRK1H3BQV0 150 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SIGLEC5O15389 551 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ZNF728P0DKX0 622 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FCGR2CP31995 323 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 PMP22Q01453 160 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MALLQ13021 153 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 IGFBP7Q16270 282 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 GGNBP1Q5YKI7 109 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 TMEM211Q6ICI0 200 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 TMEM200AQ86VY9 491 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SAXO1Q8IYX7 474 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 GALNT11Q8NCW6 608 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SVIPQ8NHG7 77 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MOB3AQ96BX8 217 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 GALNT14Q96FL9 552 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 DNTTIP1Q9H147 329 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 C12orf49Q9H741 205 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 METTL8Q9H825 291 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A10PA6NDY2 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A18PA6NE21 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A16PA6NEW6 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A20PA6NIJ5 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A8PA6NJQ4 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A7PA6NKC0 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A22PA8MWA6 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A12PA8MX19 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A5PA8MXJ8 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A23PA8MXZ1 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SYNGR1O43759 233 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 OR7C1O76099 320 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 NAPSAO96009 420 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A15PP0C7V4 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A13PP0C7W8 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A14PP0C7W9 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM90A24PP0C7X0 464 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FAM157CP0CG43 387 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 HKR1P10072 659 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 AADACP22760 399 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ARR3P36575 388 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 HAAOP46952 286 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 FGF12P61328 243 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SP6Q3SY56 376 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ZNF766Q5HY98 468 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MRPL21Q7Z2W9 205 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 SGPP2Q8IWX5 399 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 OR11L1Q8NGX0 322 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 TOMM40LQ969M1 308 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 CNTNAP3BQ96NU0 1288 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 CNTNAP3Q9BZ76 1288 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ZNF286AQ9HBT8 521 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ASCL3Q9NQ33 180 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 C1orf123Q9NWV4 160 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ARID1AO14497 2285 aa11.11□□□□□ -0.63
CDK5RAP1-201ENST00000339269 ZNF732B4DXR9 585 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 B8ZZF3 427 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 OR5AC1P0C628 307 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 CD46P15529 392 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 RBMXP38159 391 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 UCP3P55916 312 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 MST1LQ2TV78 715 aa11.1□□□□□ -0.63
CDK5RAP1-201ENST00000339269 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms