RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MBPP02686 304 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-201ENST00000338910 RFPL3SP0C7P2 107 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 HIST1H1BP16401 226 aaKnown RBP16.3■□□□□ 0.2
PSPC1-201ENST00000338910 PPP1CCP36873 323 aaKnown RBP16.3■□□□□ 0.2
PSPC1-201ENST00000338910 RAC1P63000 192 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 CHAF1BQ13112 559 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 Q3ZCU0 254 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 CHRFAM7AQ494W8 412 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 PHYHD1Q5SRE7 291 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 LRRC18Q8N456 261 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 LFNGQ8NES3 379 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 OR14L1PQ8NHC6 308 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 SGK3Q96BR1 496 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 GALNT14Q96FL9 552 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 CRYM-AS1A6NIL9 109 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF878C9JN71 531 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 ST8SIA5O15466 376 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 HCKP08631 526 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF17P17021 662 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 EIF3IQ13347 325 aaKnown RBP16.3■□□□□ 0.2
PSPC1-201ENST00000338910 TRIP6Q15654 476 aaKnown RBP16.3■□□□□ 0.2
PSPC1-201ENST00000338910 SULF2Q8IWU5 870 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 SSC4DQ8WTU2 575 aa16.3■□□□□ 0.2
PSPC1-201ENST00000338910 HPNP05981 417 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 CTSDP07339 412 aaPredicted RBP16.29■□□□□ 0.2
PSPC1-201ENST00000338910 SELLP14151 372 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 CSNK1A1P48729 337 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 ABHD12BQ7Z5M8 362 aaPredicted RBP16.29■□□□□ 0.2
PSPC1-201ENST00000338910 SUMF2Q8NBJ7 301 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 SEMA6DQ8NFY4 1073 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 RHOVQ96L33 236 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 SRXN1Q9BYN0 137 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 SMDT1Q9H4I9 107 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 GFOD1Q9NXC2 390 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 TRAPPC6AO75865 159 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 SERPINA7P05543 415 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 RNF224P0DH78 156 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 OR51T1Q8NGJ9 327 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 THOC3Q96J01 351 aaKnown RBP16.29■□□□□ 0.2
PSPC1-201ENST00000338910 RARRES2Q99969 163 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 MOB1AQ9H8S9 216 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 PARD6AQ9NPB6 346 aa16.29■□□□□ 0.2
PSPC1-201ENST00000338910 IGKV1D-8A0A087WSZ0 117 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 MED19A0JLT2 244 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-201ENST00000338910 H7C1Q1 480 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 GPR137BO60478 399 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 TNFSF15O95150 251 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ANOS1P23352 680 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ECI1P42126 302 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 CYB561P49447 251 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 COMMD2Q86X83 199 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF610Q8N9Z0 462 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 PSMF1Q92530 271 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 GPER1Q99527 375 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 PECRQ9BY49 303 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 DEPPQ9NTK1 212 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 TMED3Q9Y3Q3 217 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 SEC14L6B5MCN3 397 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 K7N7A8 449 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 GUCA1AP43080 201 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF121P58317 390 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-201ENST00000338910 B3GALT5-AS1P59052 145 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 GPR157Q5UAW9 335 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 SPINK14Q6IE38 97 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ARL6IP6Q8N6S5 226 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 OR10D4PQ8NGN7 298 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF2Q9BSG1 426 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-201ENST00000338910 RBM24Q9BX46 236 aaKnown RBP16.28■□□□□ 0.2
PSPC1-201ENST00000338910 BCO1Q9HAY6 547 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 GPR84Q9NQS5 396 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF319Q9P2F9 582 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 CNOT1A5YKK6 2376 aaKnown RBP16.28■□□□□ 0.2
PSPC1-201ENST00000338910 RTTNQ86VV8 2226 aa16.28■□□□□ 0.2
PSPC1-201ENST00000338910 IGKV1-9A0A0C4DH69 117 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 A0A1B0GV50 99 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 A0A1B0GV90 55 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 VAMP5O95183 116 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 BLVRBP30043 206 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-201ENST00000338910 SRD5A2P31213 254 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 RBP2P50120 134 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 ELOBQ15370 118 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 HIKESHIQ53FT3 197 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 SPNS3Q6ZMD2 512 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 HSD17B11Q8NBQ5 300 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 OR8B12Q8NGG6 310 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 GPR87Q9BY21 358 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 PNRC2Q9NPJ4 139 aaKnown RBP16.27■□□□□ 0.2
PSPC1-201ENST00000338910 DECR2Q9NUI1 292 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 ZDHHC8Q9ULC8 765 aa16.27■□□□□ 0.2
PSPC1-201ENST00000338910 ZNF727A8MUV8 499 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 SERPINE3A8MV23 424 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 RPL36A-HNRNPH2H7BZ11 118 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 SERPINA2P20848 420 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 KCNMB1Q16558 191 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 WIPI1Q5MNZ9 446 aaPredicted RBP16.27■□□□□ 0.19
PSPC1-201ENST00000338910 PLXDC2Q6UX71 529 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 C1QL2Q7Z5L3 287 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 Q8WTZ3 238 aa16.27■□□□□ 0.19
PSPC1-201ENST00000338910 FAM71F1Q96KD3 344 aaPredicted RBP16.27■□□□□ 0.19
PSPC1-201ENST00000338910 DHRS7CA6NNS2 312 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms