RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 UTS2BQ765I0 119 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 KCTD20Q7Z5Y7 419 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 ENTHD1Q8IYW4 607 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 OR13C3Q8NGS6 347 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 RHOXF1Q8NHV9 184 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 C10orf35Q96D05 121 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 OPALINQ96PE5 141 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 NPFFR1Q9GZQ6 430 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 HHLA2Q9UM44 414 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 TBL2Q9Y4P3 447 aaKnown RBP10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 SESN1Q9Y6P5 492 aa10.75□□□□□ -0.69
NUDCD3-201ENST00000338427 IGHV2-26A0A0B4J1V2 119 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 A0A0G2JK05 382 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 SH2D7A6NKC9 451 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 MGST3O14880 152 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 CYB5AP00167 134 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 CCR9P51686 369 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 GTF2A1P52655 376 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 P2RX3P56373 397 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 C2orf68Q2NKX9 166 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 MEDAGQ5VYS4 303 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 LHFPL2Q6ZUX7 228 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 TRAPPC6BQ86SZ2 158 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 NDNFQ8TB73 568 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 NR1H4Q96RI1 486 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 PDCD1LG2Q9BQ51 273 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 ALG8Q9BVK2 526 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 TMEM133Q9H2Q1 129 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 ZCCHC4Q9H5U6 513 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 SEBOXQ9HB31 216 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 ABCB10Q9NRK6 738 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 ORC6Q9Y5N6 252 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 LINC00312Q9Y6C7 94 aa10.74□□□□□ -0.69
NUDCD3-201ENST00000338427 SH2D1BO14796 132 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 KDM4BO94953 1096 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 ZFPL1O95159 310 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 OCM2P0CE71 109 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 OCMP0CE72 109 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 TMEM225BP0DP42 221 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 DBTP11182 482 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 CDK2P24941 298 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 IL18R1Q13478 541 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 GALEQ14376 348 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 CDK5R1Q15078 307 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 SMN1Q16637 294 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 LPCAT4Q643R3 524 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 ABHD12Q8N2K0 398 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 OR52I1Q8NGK6 324 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 OR4P4Q8NGL7 312 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 COQ2Q96H96 371 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 CITED2Q99967 270 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 MMP28Q9H239 520 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 RANBP3Q9H6Z4 567 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 NEK6Q9HC98 313 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 RAB18Q9NP72 206 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 EXOSC4Q9NPD3 245 aaKnown RBP10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 ERVK13-1Q9NX77 482 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 ZNF581Q9P0T4 197 aa10.73□□□□□ -0.69
NUDCD3-201ENST00000338427 LOC100130705A0A1B0GUX0 176 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 ADARB2-AS1A8MUL3 147 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 DEGS1O15121 323 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 IGHV3-7P01780 117 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 RBP4P02753 201 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 ZNF44P15621 663 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 LMO1P25800 156 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 ERP29P30040 261 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 SOX2P48431 317 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 ZP1P60852 638 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 Q8IYB0 196 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 Q8N2B8 174 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 OR51A2Q8NGJ7 313 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 APH1BQ8WW43 257 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 SPSB1Q96BD6 273 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 ORAI1Q96D31 301 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 CLEC7AQ9BXN2 247 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 PRSS22Q9GZN4 317 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 PPIL3Q9H2H8 161 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 ZNF286AQ9HBT8 521 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 S100A14Q9HCY8 104 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 FAM118AQ9NWS6 357 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 GLS2Q9UI32 602 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 PLXNB1O43157 2135 aa10.72□□□□□ -0.69
NUDCD3-201ENST00000338427 TRAV39A0A0B4J263 110 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 FAM90A22PA8MWA6 464 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 SLC33A1O00400 549 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 HSPB6O14558 160 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 MT-ND2P03891 347 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 HCKP08631 526 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 HTR1DP28221 377 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 ATXN7L3Q14CW9 347 aaPredicted RBP10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 KISS1Q15726 138 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 ZSCAN26Q16670 478 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 C17orf58Q2M2W7 97 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 BEAN1Q3B7T3 259 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 SPIN3Q5JUX0 258 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 XAF1Q6GPH4 301 aa10.71□□□□□ -0.69
NUDCD3-201ENST00000338427 ZFP1Q6P2D0 407 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms