RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 CNTD2Q9H8S5 307 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF629Q9UEG4 869 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 OSGIN2Q9Y236 505 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 U3KQA8 63 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 DOCK9Q9BZ29 2069 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 RPL36A-HNRNPH2H7BZ11 118 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 HBE1P02100 147 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 C1QBP02746 253 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 FPR2P25090 351 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 KIR3DL2P43630 455 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 IGFBP7Q16270 282 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ATP1A1-AS1Q5TC04 95 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PRAMEF5Q5TYX0 476 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PRAMEF6Q5VXH4 476 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 LYPD8Q6UX82 237 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 GALNT11Q8NCW6 608 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF486Q96H40 463 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 AMELYQ99218 206 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 FAM212BQ9NTI7 297 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ZMIZ1Q9ULJ6 1067 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF646O15015 1829 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 TAAR5O14804 337 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 TSPAN15O95858 294 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 CST4P01036 141 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ZBTB25P24278 435 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 GFRA1P56159 465 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 FOXO1Q12778 655 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 HIKESHIQ53FT3 197 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 TMEM123Q8N131 208 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 ARHGAP5-AS1Q96IT6 56 aa5.98□□□□□ -1.45
SF3B1-201ENST00000335508 LSM5Q9Y4Y9 91 aaKnown RBP5.98□□□□□ -1.45
SF3B1-201ENST00000335508 PRRC2CQ9Y520 2896 aaKnown RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 I3L521 148 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 TGM6O95932 706 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 OMGP23515 440 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 NFYBP25208 207 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 RBMS3Q6XE24 437 aaKnown RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 BTLAQ7Z6A9 289 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 OR8G5Q8NG78 346 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 DCUN1D4Q92564 292 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 GNPNAT1Q96EK6 184 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 TANC1Q9C0D5 1861 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 SDCBPO00560 298 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 SPRY3O43610 288 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 SOX15O60248 233 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 LYPD3O95274 346 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 CDS2O95674 445 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 EIF4EP06730 217 aaKnown RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 GPM6AP51674 278 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 C3AR1Q16581 482 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 TCTEX1D2Q8WW35 142 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 GTF3AQ92664 365 aaKnown RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 C20orf85Q9H1P6 137 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 C1RLQ9NZP8 487 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 CLN8Q9UBY8 286 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 CDRT15L2A8MXV6 281 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 ICMTO60725 284 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 JTBO76095 146 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 S100A11P31949 105 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 CD200P41217 278 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 RAB11AP62491 216 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 ZNF616Q08AN1 781 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 MPPED2Q15777 294 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 PRSS45Q7RTY3 260 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 ZDHHC8Q9ULC8 765 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 IFNA10P01566 189 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 CTSDP07339 412 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 HRH1P35367 487 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 BAK1Q16611 211 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 RTL8BQ17RB0 113 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 DMBX1Q8NFW5 382 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 ADAT3Q96EY9 351 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 WNT5BQ9H1J7 359 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 DEPPQ9NTK1 212 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 IFNA2P01563 188 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 LHX2P50458 406 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 ENDOGQ14249 297 aaKnown RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 MARCH1Q8TCQ1 289 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 REPIN1Q9BWE0 567 aaKnown RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 WDR13Q9H1Z4 485 aa5.97□□□□□ -1.45
SF3B1-201ENST00000335508 SIRT4Q9Y6E7 314 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-201ENST00000335508 OR4E1P0C645 316 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 PMELP40967 661 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 VAX1Q5SQQ9 334 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 SHISA5Q8N114 240 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 OR8H3Q8N146 312 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 DVL3Q92997 716 aaPredicted RBP5.96□□□□□ -1.45
SF3B1-201ENST00000335508 HES7Q9BYE0 225 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 CHD5Q8TDI0 1954 aa5.96□□□□□ -1.45
SF3B1-201ENST00000335508 C10orf142B7Z368 130 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 B9A039 149 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 HS3ST1O14792 307 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 CDC14BO60729 498 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 DUS4LO95620 317 aaKnown RBP5.96□□□□□ -1.46
SF3B1-201ENST00000335508 CCR6P51684 374 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 FGF12P61328 243 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 EFNB1P98172 346 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 LYG2Q86SG7 212 aa5.96□□□□□ -1.46
SF3B1-201ENST00000335508 BCL2L2Q92843 193 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms