RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CDO1Q16878 200 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HLA-DRB5Q30154 266 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LBHQ53QV2 105 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM255AQ5JRV8 349 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RBM48Q5RL73 367 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SAPCD1Q5SSQ6 148 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PRAMEF9Q5VWM5 478 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR4F3Q6IEY1 312 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 FAHD1Q6P587 224 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TMPRSS11FQ6ZWK6 438 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SLC38A6Q8IZM9 456 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR6V1Q8N148 313 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TTC9CQ8N5M4 171 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TRIML2Q8N7C3 387 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CCNYQ8ND76 341 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR4P4Q8NGL7 312 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ABHD4Q8TB40 342 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MARCH1Q8TCQ1 289 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PHLDA1Q8WV24 401 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF566Q969W8 418 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ELMO3Q96BJ8 720 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF669Q96BR6 464 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 KTI12Q96EK9 354 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RNF31Q96EP0 1072 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZC3HAV1LQ96H79 300 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 C4orf45Q96LM5 186 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ALKBH3Q96Q83 286 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 NEURL2Q9BR09 285 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CLEC7AQ9BXN2 247 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DGCR6LQ9BY27 220 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PBOV1Q9GZY1 135 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SLC25A32Q9H2D1 315 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM133Q9H2Q1 129 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 KLHL31Q9H511 634 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CDH20Q9HBT6 801 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CHRAC1Q9NRG0 131 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TBC1D23Q9NUY8 699 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 EXD2Q9NVH0 621 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HAO2Q9NYQ3 351 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MARCOQ9UEW3 520 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RSL24D1Q9UHA3 163 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 FOXA2Q9Y261 457 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 V9GYS6 101 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TRAV40A0A0B4J280 105 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 A0A0B4J2E0 115 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PRSS51A0A1B0GVH4 220 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 A0A1B0GX12 115 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TCRBV7S2A1N4TA0A589 114 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 KRT87PA6NCN2 255 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF732B4DXR9 585 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 C12orf77C9JDV5 145 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 EIF1AYO14602 144 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 NDUFB5O43674 189 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CHP2O43745 196 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TMPRSS11DO60235 418 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ADAP1O75689 374 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF205O95201 554 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CXCL2P19875 107 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CERS1P27544 350 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DCKP27707 260 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 APLNRP35414 380 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OPRL1P41146 370 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HTR6P50406 440 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 FUT6P51993 359 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CRISP1P54107 249 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PAX9P55771 341 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SCAND1P57086 179 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 MAT1AQ00266 395 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HSF2Q03933 536 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 STX3Q13277 289 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ENDOGQ14249 297 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LASP1Q14847 261 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 GUCA2BQ16661 112 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 HSD17B12Q53GQ0 312 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TYW3Q6IPR3 259 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CFAP77Q6ZQR2 320 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TRPM8Q7Z2W7 1104 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LYG2Q86SG7 212 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 IGDCC3Q8IVU1 814 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ANKRD42Q8N9B4 389 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR10W1Q8NGF6 305 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR51G2Q8NGK0 314 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR9G4Q8NGQ1 327 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR2T10Q8NGZ9 312 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RAB8BQ92930 207 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SLAMF9Q96A28 289 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM80Q96HE8 168 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 OR10C1Q96KK4 312 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 LINC00479Q96M42 142 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 C16orf45Q96MC5 204 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 CCDC140Q96MF4 163 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PAFAH2Q99487 392 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SSX3Q99909 188 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 PNRC2Q9NPJ4 139 aaKnown RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 DPM3Q9P2X0 92 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RABL2AQ9UBK7 228 aaPredicted RBP1.08□□□□□ -2.24
LINC00643-201ENST00000334389 SLC2A6Q9UGQ3 507 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 RABL2BQ9UNT1 228 aa1.08□□□□□ -2.24
LINC00643-201ENST00000334389 ERGIC3Q9Y282 383 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms