RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ATOX1O00244 68 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TNFRSF6BO95407 300 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 CBX7O95931 251 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 UCNP55089 124 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 WNT3P56703 355 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LINC01545Q5VT33 79 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SCAMP4Q969E2 229 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 NEIL1Q96FI4 390 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 COQ2Q96H96 371 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 HBEGFQ99075 208 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 APOOQ9BUR5 198 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC7A10Q9NS82 523 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 KIAA1456Q9P272 454 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 NALCNQ8IZF0 1738 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 IFT172Q9UG01 1749 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TRAV38-1A0A0B4J264 116 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TAX1BP3O14907 124 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 CR2P20023 1033 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 GLCCI1Q86VQ1 547 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SIAH3Q8IW03 269 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR51G2Q8NGK0 314 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LOC100289279A0A1B0GTE1 492 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM272A0A1B0GTI8 110 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR51F1A6NGY5 319 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SYNGR1O43759 233 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 F12P00748 615 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 IGHEP01854 428 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 UFM1P61960 85 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 ISXQ2M1V0 245 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLCO1C1Q9NYB5 712 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 RCE1Q9Y256 329 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 A0A087WWC5 75 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 A0A1B0GWA3 101 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF735P0CB33 412 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 WNT7BP56706 349 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF718Q3SXZ3 478 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LCN10Q6JVE6 187 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 H2BFWTQ7Z2G1 175 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 WFDC11Q8NEX6 87 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR2V1Q8NHB1 315 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 CDCA3Q99618 268 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC17A9Q9BYT1 436 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TECRQ9NZ01 308 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TAAR2Q9P1P5 351 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 U3KQE9 123 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SIGLEC1Q9BZZ2 1709 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TRAV8-1A0A0A6YYK1 113 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 PODNL1Q6PEZ8 512 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TTC9CQ8N5M4 171 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 OR10S1Q8NGN2 331 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LPAR4Q99677 370 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 FGF21Q9NSA1 209 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 GPSM3Q9Y4H4 160 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 C21orf140B9A014 251 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LRP3O75074 770 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 GCM2O75603 506 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 MVDP53602 400 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 CLCQ05315 142 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 HYAL2Q12891 473 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LIMS2Q7Z4I7 341 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 LPAR2Q9HBW0 351 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 A0A1W2PQ45 241 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 A0A1W2PQY0 241 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 YJEFN3A6XGL0 299 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SOCS6O14544 535 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 NDUFS4O43181 175 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC25A20O43772 301 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 FAM106CPP0CH98 169 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 FAM106AQ4KMX7 169 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 TCTEX1D4Q5JR98 221 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZPBP2Q6X784 338 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 C1QL4Q86Z23 238 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 PHLDA1Q8WV24 401 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 NKD2Q969F2 451 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 RAB40CQ96S21 281 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 MCHR1Q99705 422 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 CHST5Q9GZS9 411 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 CCL27Q9Y4X3 112 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 SIGLEC16A6NMB1 481 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 PTGESO14684 152 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 YBX3P16989 372 aaKnown RBP eCLIP5.43□□□□□ -1.541e-6■■□□□ 12.3
CDC42BPA-201ENST00000334218 FUT7Q11130 342 aa5.43□□□□□ -1.54
CDC42BPA-201ENST00000334218 FAHP16930 419 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC25A1P53007 311 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 SELENBP1Q13228 472 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF322Q6U7Q0 402 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 NPNTQ6UXI9 565 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF784Q8NCA9 323 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 UBE2ZQ9H832 354 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 MED29Q9NX70 200 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 KBTBD11O94819 623 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 NXPH2O95156 264 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 APOBEC3AP31941 199 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 KLHDC3Q9BQ90 382 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 WDR54Q9H977 334 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 OARD1Q9Y530 152 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ATP23Q9Y6H3 246 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 C7orf77A4D0Y5 90 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 B4GALT3O60512 393 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms