RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 KCNIP3Q9Y2W7 256 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 ASPMQ8IZT6 3477 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 TSTD3H0UI37 97 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 SLC31A2O15432 143 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 GGNBP1Q5YKI7 109 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 LYZL2Q7Z4W2 148 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 TMEM68Q96MH6 324 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 RARRES2Q99969 163 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 ST3GAL6Q9Y274 331 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 HS3ST3B1Q9Y662 390 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 F8VVB4 439 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 F8VWA3 439 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 OR2C1O95371 312 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 DVL1P1P54792 670 aaPredicted RBP17.3■□□□□ 0.36
SPNS2-201ENST00000329078 PCOLCEQ15113 449 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 TRIM61Q5EBN2 209 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 GFI1BQ5VTD9 330 aa17.3■□□□□ 0.36
SPNS2-201ENST00000329078 TMEM182Q6ZP80 229 aaPredicted RBP17.3■□□□□ 0.36
SPNS2-201ENST00000329078 ZNF728P0DKX0 622 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 FOLR3P41439 243 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 HAGHQ16775 308 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 SLC25A26Q70HW3 274 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 RTN4IP1Q8WWV3 396 aaPredicted RBP17.29■□□□□ 0.36
SPNS2-201ENST00000329078 SLC5A7Q9GZV3 580 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 TMEM100Q9NV29 134 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 C1orf123Q9NWV4 160 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 CACNA1HO95180 2353 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 TPRP12270 2363 aaKnown RBP17.29■□□□□ 0.36
SPNS2-201ENST00000329078 AP4M1O00189 453 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 PET100P0DJ07 73 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 GAMTQ14353 236 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 ETFRF1Q6IPR1 90 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 SLC23A3Q6PIS1 610 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 TIPARPQ7Z3E1 657 aaKnown RBP17.29■□□□□ 0.36
SPNS2-201ENST00000329078 CALHM2Q9HA72 323 aa17.29■□□□□ 0.36
SPNS2-201ENST00000329078 RIF1Q5UIP0 2472 aaKnown RBP17.29■□□□□ 0.36
SPNS2-201ENST00000329078 CDRT15L2A8MXV6 281 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 UBE2CO00762 179 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 HERV-K104P61576 105 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 TCEAL6Q6IPX3 200 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 TMPRSS5Q9H3S3 457 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 CBY1Q9Y3M2 126 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 IGLV3-12A0A075B6K2 115 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 NRASP01111 189 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 TBPP20226 339 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 DTD1Q8TEA8 209 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 EMG1Q92979 244 aaKnown RBP17.28■□□□□ 0.36
SPNS2-201ENST00000329078 SLC26A1Q9H2B4 701 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 RAB18Q9NP72 206 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 FAM166BA8MTA8 275 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 IGFBP7Q16270 282 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 SPINK14Q6IE38 97 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 TMEM217Q8N7C4 229 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 SAP25Q8TEE9 199 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 NMES1Q9C002 83 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 TREM2Q9NZC2 230 aa17.28■□□□□ 0.36
SPNS2-201ENST00000329078 ZIC3O60481 467 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 FCGR3AP08637 254 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 LIFP15018 202 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 PPP1CCP36873 323 aaKnown RBP17.27■□□□□ 0.36
SPNS2-201ENST00000329078 RBP2P50120 134 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 BATFQ16520 125 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 FGFBP3Q8TAT2 258 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 HAS2Q92819 552 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 CNTNAP3Q9BZ76 1288 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 DMRT1Q9Y5R6 373 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 SNRPCP09234 159 aaKnown RBP17.27■□□□□ 0.36
SPNS2-201ENST00000329078 PYY3Q5JQD4 70 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 ASB13Q8WXK3 278 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 KPTNQ9Y664 436 aa17.27■□□□□ 0.36
SPNS2-201ENST00000329078 C10orf142B7Z368 130 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 UMODP07911 640 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 HKR1P10072 659 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 EPHA1P21709 976 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 FBXW12Q6X9E4 464 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 LINC00696Q6ZRV3 163 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 CHST5Q9GZS9 411 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 SLC7A11Q9UPY5 501 aa17.27■□□□□ 0.35
SPNS2-201ENST00000329078 ZNF25P17030 456 aaPredicted RBP17.26■□□□□ 0.35
SPNS2-201ENST00000329078 HGFACQ04756 655 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 VAX1Q5SQQ9 334 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 ZNF107Q9UII5 783 aaPredicted RBP17.26■□□□□ 0.35
SPNS2-201ENST00000329078 ANXA10Q9UJ72 324 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 K7ESF4 209 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 CD37P11049 281 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 CFPP27918 469 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 NTF4P34130 210 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 THBS4P35443 961 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 C3AR1Q16581 482 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 CLEC12BQ2HXU8 276 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 RSPO1Q2MKA7 263 aaPredicted RBP17.26■□□□□ 0.35
SPNS2-201ENST00000329078 FAHD2BQ6P2I3 314 aaPredicted RBP17.26■□□□□ 0.35
SPNS2-201ENST00000329078 CARFQ8N187 725 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 FAHD2AQ96GK7 314 aa17.26■□□□□ 0.35
SPNS2-201ENST00000329078 DSPP15924 2871 aaKnown RBP17.26■□□□□ 0.35
SPNS2-201ENST00000329078 ONECUT2O95948 504 aa17.25■□□□□ 0.35
SPNS2-201ENST00000329078 RAB5CP51148 216 aa17.25■□□□□ 0.35
SPNS2-201ENST00000329078 DSCR4P56555 118 aaPredicted RBP17.25■□□□□ 0.35
SPNS2-201ENST00000329078 OR8G1Q15617 311 aa17.25■□□□□ 0.35
SPNS2-201ENST00000329078 FAM189A2Q15884 450 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms