RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 DNAAF1Q8NEP3 725 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 RFT1Q96AA3 541 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 GABARAPL1Q9H0R8 117 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 GAL3ST2Q9H3Q3 398 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 RIBC2Q9H4K1 309 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 SEBOXQ9HB31 216 aaPredicted RBP20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 EXOSC4Q9NPD3 245 aaKnown RBP20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 DPM3Q9P2X0 92 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 GSTK1Q9Y2Q3 226 aa20.05■□□□□ 0.8
PPP4R4-202ENST00000328839 TRGV10A0A0A0MS01 117 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 IGKV1-9A0A0C4DH69 117 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 TCRBV4S1A1TA0A5B7 111 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 FASP25445 335 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 ARHGDIBP52566 201 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 KHDC1LQ5JSQ8 128 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 OR52W1Q6IF63 320 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 ZNF596Q8TC21 504 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 SLC25A33Q9BSK2 321 aa20.04■□□□□ 0.8
PPP4R4-202ENST00000328839 SH2D1BO14796 132 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 LPLP06858 475 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 ATF1P18846 271 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 PRKACBP22694 351 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 CDK2P24941 298 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 ERP29P30040 261 aaKnown RBP20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 POLR2IP36954 125 aaKnown RBP20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 ABCA11PQ4W5N1 156 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 LHFPL2Q6ZUX7 228 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 RTN4RL2Q86UN3 420 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 FGGYQ96C11 551 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 LIN7BQ9HAP6 207 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 ING3Q9NXR8 418 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 DNAH3Q8TD57 4116 aa20.03■□□□□ 0.8
PPP4R4-202ENST00000328839 OR2H2O95918 312 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 CDC42P60953 191 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 ZNF85Q03923 595 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 SCN1BQ07699 218 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 PDZK1IP1Q13113 114 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 KPNB1Q14974 876 aaKnown RBP20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 TMEM244Q5VVB8 128 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 OR8J1Q8NGP2 316 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 BCAS4Q8TDM0 211 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 RFKQ969G6 155 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 EME1Q96AY2 570 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 OPALINQ96PE5 141 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 HMG20AQ9NP66 347 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 AP4S1Q9Y587 144 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 PCDHGB5Q9Y5G0 923 aa20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 TSSC4Q9Y5U2 329 aaPredicted RBP20.02■□□□□ 0.8
PPP4R4-202ENST00000328839 FUOMA2VDF0 154 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 SH2D7A6NKC9 451 aaPredicted RBP20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 LEUTXA8MZ59 168 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 GLIPR1P48060 266 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 SLC35A2P78381 396 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 BDH1Q02338 343 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 AESQ08117 197 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 TCTEX1D4Q5JR98 221 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 HEPN1Q6WQI6 88 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 WFDC9Q8NEX5 89 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 OR4X2Q8NGF9 303 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 OR5D18Q8NGL1 313 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 OR2G2Q8NGZ5 317 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 MYDGFQ969H8 173 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 SPACA5Q96QH8 159 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 NEK6Q9HC98 313 aa20.01■□□□□ 0.79
PPP4R4-202ENST00000328839 TOR1AO14656 332 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 ZNF44P15621 663 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 ISL1P61371 349 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 TMED1Q13445 227 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 RBM39Q14498 530 aaKnown RBP20■□□□□ 0.79
PPP4R4-202ENST00000328839 C9orf152Q5JTZ5 239 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 UTS2BQ765I0 119 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 SPSB1Q96BD6 273 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 ZNF286AQ9HBT8 521 aa20■□□□□ 0.79
PPP4R4-202ENST00000328839 OR2F2O95006 317 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 GDNFP39905 211 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 CEACAM3P40198 252 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 C10orf99Q6UWK7 81 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 OR4D6Q8NGJ1 314 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 RNF166Q96A37 237 aaPredicted RBP19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 RBM14Q96PK6 669 aaKnown RBP19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 GABARAPL3Q9BY60 117 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 TAS2R3Q9NYW6 316 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 FRRS1LQ9P0K9 344 aa19.99■□□□□ 0.79
PPP4R4-202ENST00000328839 IGKV1-12A0A0C4DH73 117 aa19.98■□□□□ 0.79
PPP4R4-202ENST00000328839 IGKV1D-12P01611 117 aa19.98■□□□□ 0.79
PPP4R4-202ENST00000328839 FCGR1AP12314 374 aa19.98■□□□□ 0.79
PPP4R4-202ENST00000328839 PTGFRP43088 359 aa19.98■□□□□ 0.79
PPP4R4-202ENST00000328839 OR13C3Q8NGS6 347 aa19.98■□□□□ 0.79
PPP4R4-202ENST00000328839 OR13C9Q8NGT0 318 aa19.98■□□□□ 0.79
PPP4R4-202ENST00000328839 DAPL1A0PJW8 107 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 ODAMA1E959 279 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 CLIC3O95833 236 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 IGLV1-47P01700 117 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 HTR1AP08908 422 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 OR3A4PP47883 348 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 NANOS3P60323 173 aaKnown RBP19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 ATXN7L3Q14CW9 347 aaPredicted RBP19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 HLA-DRB5Q30154 266 aa19.97■□□□□ 0.79
PPP4R4-202ENST00000328839 KRBOX4Q5JUW0 171 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms