RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 HLA-HP01893 362 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 CRYBA1P05813 215 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 DTYMKP23919 212 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 F2RL1P55085 397 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 EIF3IQ13347 325 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 ABHD17BQ5VST6 288 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 GLYATL2Q8WU03 294 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 SLAMF9Q96A28 289 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 MAGT1Q9H0U3 335 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 SH3BGRL3Q9H299 93 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 RPS10P5Q9NQ39 176 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 HSF4Q9ULV5 492 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 NOSIPQ9Y314 301 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 NSG2Q9Y328 171 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 BORCS7-ASMTA0A0B4J1R7 106 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 ZXDAP98168 799 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 LIAT1Q6ZQX7 453 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 LGI3Q8N145 548 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 CPEB3Q8NE35 698 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 OR56B2PQ8NGI1 322 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 RXFP4Q8TDU9 374 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 ARRDC1-AS1Q9H2J1 176 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 FAM212BQ9NTI7 297 aaPredicted RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 ABI3Q9P2A4 366 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 TUBD1Q9UJT1 453 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 UBE2J1Q9Y385 318 aaPredicted RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 hCG_38984A0A1B0GV85 526 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 LRRC3CA6NJW4 275 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 M0R036 132 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 SNRNP70P08621 437 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 EDN3P14138 238 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 DHRS7BQ6IAN0 325 aaPredicted RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 CCDC54Q8NEL0 328 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 THOC3Q96J01 351 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 PLEKHA2Q9HB19 425 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 LRFN1Q9P244 771 aa12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
ATP2C1-201ENST00000328560 HAAOP46952 286 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 KCNJ3P48549 501 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 PCBD1P61457 104 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 SSPNQ14714 243 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 BTNL8Q6UX41 500 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 SLC35G3Q8N808 338 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 RFNGQ9Y644 331 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 B4E171 279 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 SPP1P10451 314 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 DAOP14920 347 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 FUT3P21217 361 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 TSPAN7P41732 249 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 GPM6AP51674 278 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 ARF1P84077 181 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 C14orf79Q96F83 325 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 IL36RNQ9UBH0 155 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 BOKQ9UMX3 212 aaPredicted RBP12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 FAM166BA8MTA8 275 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 FOXG1P55316 489 aaPredicted RBP12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 EXTL1Q92935 676 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 HES7Q9BYE0 225 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 FBXO7Q9Y3I1 522 aa12.13□□□□□ -0.47
ATP2C1-201ENST00000328560 PPYP01298 95 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 CELA3AP09093 270 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 FOSL1P15407 271 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 BCL3P20749 454 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 MPLP40238 635 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 CEBPGP53567 150 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 GNMTQ14749 295 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 LINC00518Q8N0U6 118 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 SUCNR1Q9BXA5 334 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 R4GN57 208 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 NKX2-6A6NCS4 301 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 TNFSF12O43508 249 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 RAB13P51153 203 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 TMEM182Q6ZP80 229 aaPredicted RBP12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 ZNF565Q8N9K5 539 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 CD300LFQ8TDQ1 290 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 GUCD1Q96NT3 240 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 SERPINA7P05543 415 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 TGIF1Q15583 401 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 TSC22D1Q15714 1073 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 C10orf91Q5T1B1 145 aa12.12□□□□□ -0.47
ATP2C1-201ENST00000328560 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms