RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 LHFPL2Q6ZUX7 228 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 FGFBP3Q8TAT2 258 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 EXTL1Q92935 676 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 NOSIPQ9Y314 301 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 TIMM10BQ9Y5J6 103 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 V9GYS6 101 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 ICE1Q9Y2F5 2266 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 TRAV39A0A0B4J263 110 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 LOC102725191A0A1B0GVB3 256 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 MEX3AA1L020 520 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 FAM166BA8MTA8 275 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 TOX3O15405 576 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 MEOX2P50222 304 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 FAM27BQ5VT28 67 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 RBMS3Q6XE24 437 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 CALHM1Q8IU99 346 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 FADS6Q8N9I5 356 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 PARP11Q9NR21 331 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 A0A087WZY1 265 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 PDCD6O75340 191 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 PTAFRP25105 342 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 FKBP2P26885 142 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 RUNX1Q01196 453 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 FABP9Q0Z7S8 132 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 SHEQ5VZ18 495 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 TMEM38BQ9NVV0 291 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 IGHV1-45A0A0A0MS14 117 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 ADAM20O43506 726 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 GPR137BO60478 399 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 EIF3GO75821 320 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 PPYP01298 95 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 EDN3P14138 238 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 CHATP28329 748 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 SLC23A3Q6PIS1 610 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 DPPA2Q7Z7J5 298 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 TMEM123Q8N131 208 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 ZIC4Q8N9L1 334 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 SGCZQ96LD1 299 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 TP53RKQ96S44 253 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 SLC7A10Q9NS82 523 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 KCNS2Q9ULS6 477 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 C10orf142B7Z368 130 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 UMODP07911 640 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 FUT3P21217 361 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 RAC3P60763 192 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 KCNMB1Q16558 191 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 ALKBH2Q6NS38 261 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF488Q96MN9 340 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 TM2D1Q9BX74 207 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 SUCNR1Q9BXA5 334 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 WFDC1Q9HC57 220 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 IL36RNQ9UBH0 155 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 C3orf85A0A1B0GTC6 90 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 COX6A1P12074 109 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 TMEM187Q14656 261 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 HIST3H3Q16695 136 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 C10orf128Q5T292 105 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 AKR1C8PQ5T2L2 129 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 MCEMP1Q8IX19 187 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 SKA3Q8IX90 412 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 OR5C1Q8NGR4 320 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 CPNE4Q96A23 557 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 RARRES2Q99969 163 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 ABHD14AQ9BUJ0 271 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 FANCFQ9NPI8 374 aa11.17□□□□□ -0.62
HMGCS1-201ENST00000325110 WDFY3Q8IZQ1 3526 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 TRIM61Q5EBN2 209 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 CXorf66Q5JRM2 361 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 SPINK14Q6IE38 97 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 MRPL14Q6P1L8 145 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 BTNL8Q6UX41 500 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 LINC00696Q6ZRV3 163 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 SAP25Q8TEE9 199 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 FREM2Q5SZK8 3169 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 WDFY4Q6ZS81 3184 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 CD63P08962 238 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 FUT6P51993 359 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 EWSR1Q01844 656 aaKnown RBP eCLIP11.16□□□□□ -0.621e-19■■■□□ 14.9
HMGCS1-201ENST00000325110 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 TBC1D26Q86UD7 250 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 HLA-CQ95604 372 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 FAM86C1Q9NVL1 165 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 SEMA5BQ9P283 1151 aa11.16□□□□□ -0.62
HMGCS1-201ENST00000325110 IGLV3-32A0A0A0MS00 114 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 TRAPPC2LH3BP13 241 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 SCTP09683 121 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 BCL3P20749 454 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 NTF4P34130 210 aa11.15□□□□□ -0.62
HMGCS1-201ENST00000325110 H3F3AP84243 136 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms