RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 LRP11Q86VZ4 500 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 ABHD1Q96SE0 405 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 PPOXP50336 477 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 FOXC1Q12948 553 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 TNXAQ16473 311 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 CLEC18BQ6UXF7 455 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 GPR87Q9BY21 358 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 TRAV34A0A0B4J273 112 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 LSM6P62312 80 aaKnown RBP18.6■□□□□ 0.57
RNF40-201ENST00000324685 LHX8Q68G74 356 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 OR10G8Q8NGN5 311 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 SERGEFQ9UGK8 458 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 CRISP2P16562 243 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 CAMPP49913 170 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 TUSC1Q2TAM9 212 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 ITGBL1O95965 494 aaPredicted RBP18.6■□□□□ 0.57
RNF40-201ENST00000324685 AREGP15514 252 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 HERVK_113P61574 105 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 NUBPLQ8TB37 319 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 RAB1BQ9H0U4 201 aa18.6■□□□□ 0.57
RNF40-201ENST00000324685 CDC42EP2O14613 210 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 SEMA7AO75326 666 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 MNX1P50219 401 aaPredicted RBP18.59■□□□□ 0.57
RNF40-201ENST00000324685 MRPS11P82912 194 aaKnown RBP18.59■□□□□ 0.57
RNF40-201ENST00000324685 AWAT1Q58HT5 328 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 TMEM65Q6PI78 240 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 MOGAT1Q96PD6 335 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 NUMA1Q14980 2115 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 TRAV38-1A0A0B4J264 116 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 MPZL1O95297 269 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 SKP2Q13309 424 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 B3GNTL1Q67FW5 361 aaPredicted RBP18.59■□□□□ 0.57
RNF40-201ENST00000324685 SEZ6L2Q6UXD5 910 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 ZG16BQ96DA0 208 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 LYZL6O75951 148 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 HLA-DRB5Q30154 266 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 RBM38Q9H0Z9 239 aaKnown RBP18.59■□□□□ 0.57
RNF40-201ENST00000324685 SLC52A3Q9NQ40 469 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 LIPGQ9Y5X9 500 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 MED19A0JLT2 244 aaPredicted RBP18.59■□□□□ 0.57
RNF40-201ENST00000324685 C11orf94C9JXX5 98 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 RPL30P62888 115 aaKnown RBP18.59■□□□□ 0.57
RNF40-201ENST00000324685 FAM219BQ5XKK7 198 aa18.59■□□□□ 0.57
RNF40-201ENST00000324685 ACP1P24666 158 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 RAC3P60763 192 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 FAM109BQ6ICB4 259 aaPredicted RBP18.58■□□□□ 0.57
RNF40-201ENST00000324685 C5orf17Q8NAS9 161 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 TMEM265A0A087WTH1 108 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 IGSF23A1L1A6 192 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 CT62P0C5K7 136 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 TMIGD3P0DMS9 266 aaPredicted RBP18.58■□□□□ 0.57
RNF40-201ENST00000324685 HYAL1Q12794 435 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 FAM74A3Q4VXF1 159 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 VN1R4Q7Z5H5 301 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 BVESQ8NE79 360 aa18.58■□□□□ 0.57
RNF40-201ENST00000324685 TTRP02766 147 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 CRHP06850 196 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 FOXO1Q12778 655 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 PWWP2BQ6NUJ5 590 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 Q6ZN92 141 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 WDR13Q9H1Z4 485 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 WNT16Q9UBV4 365 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 PRSS50Q9UI38 385 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 CCL2P13500 99 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 RIGQ13278 110 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 SFTPA2Q8IWL1 248 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 SFTPA1Q8IWL2 248 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 LILRB1Q8NHL6 650 aaPredicted RBP18.58■□□□□ 0.56
RNF40-201ENST00000324685 COX14Q96I36 57 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 MAP1LC3CQ9BXW4 147 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 ADAP1O75689 374 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 PRSS1P07477 247 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 MESTQ5EB52 335 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 RAB1CQ92928 201 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 PTP4A1Q93096 173 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 VAX2Q9UIW0 290 aa18.58■□□□□ 0.56
RNF40-201ENST00000324685 TMEM208Q9BTX3 173 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 COL22A1Q8NFW1 1626 aaPredicted RBP18.57■□□□□ 0.56
RNF40-201ENST00000324685 TMEM218A2RU14 115 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 STAG3L2P0CL84 134 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 BHLHA15Q7RTS1 189 aaPredicted RBP18.57■□□□□ 0.56
RNF40-201ENST00000324685 PERPQ96FX8 193 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 UFC1Q9Y3C8 167 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 V9GYH0 126 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 LGALS7P47929 136 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 SLC25A42Q86VD7 318 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 SIRT7Q9NRC8 400 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 DTD1Q8TEA8 209 aa18.57■□□□□ 0.56
RNF40-201ENST00000324685 C3orf80F5H4A9 247 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 NXPH1P58417 271 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 GAMTQ14353 236 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 SLC25A30Q5SVS4 291 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 OR1L6Q8NGR2 347 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 PLA2G2FQ9BZM2 168 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 FAM90A27PA6NNH2 459 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 CDRT15L2A8MXV6 281 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 ZNF207O43670 478 aaKnown RBP18.56■□□□□ 0.56
RNF40-201ENST00000324685 PSMB2P49721 201 aa18.56■□□□□ 0.56
RNF40-201ENST00000324685 YBX1P67809 324 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms