RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PARP12Q9H0J9 701 aaKnown RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF275Q9NSD4 429 aaPredicted RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 TRAV8-2A0A0B4J237 113 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 LBX1P52954 281 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF141Q15928 474 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 CT83Q5H943 113 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 LINC00615Q96LM1 132 aaPredicted RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 QSER1Q2KHR3 1735 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 M0QZ24 198 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 CDC14BO60729 498 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 PTP4A3O75365 173 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 CLDN2P57739 230 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ZAR1LA6NP61 321 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 PLPP1O14494 284 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF195O14628 629 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 PPP1R17O96001 155 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 PRSS56P0CW18 603 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 ARSAP15289 507 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 PPICP45877 212 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 CGB2Q6NT52 195 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 GFYI3L273 518 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SYNGR2O43760 224 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 LSM2Q9Y333 95 aaKnown RBP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SIT1Q9Y3P8 196 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 CDK2AP1O14519 115 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF324O75467 553 aaPredicted RBP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 PGA3P0DJD8 388 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 OPRK1P41145 380 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SELENOHQ8IZQ5 122 aaKnown RBP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 OR5D18Q8NGL1 313 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF418Q8TF45 676 aaPredicted RBP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 TCFL5Q9UL49 500 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 DAPP1Q9UN19 280 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 LOC107986453A0A1B0GWG9 222 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 C7orf72A4D263 438 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SOCS6O14544 535 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 KLK8O60259 260 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 TRGC2P03986 189 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 MARCH8Q5T0T0 291 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 TMEM255BQ8WV15 326 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 RARRES2Q99969 163 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 RBFOX2O43251 390 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 RPL34P49207 117 aaKnown RBP8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SPNS3Q6ZMD2 512 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 RNF165Q6ZSG1 346 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 OXGR1Q96P68 337 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 ANK1P16157 1881 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 CALHM2Q9HA72 323 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 FUT9Q9Y231 359 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SHBQ15464 509 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 Q6ZSR9 355 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 PRRG2O14669 202 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 ERGP11308 486 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 VKORC1L1Q8N0U8 176 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 TWSG1Q9GZX9 223 aa8.72□□□□□ -1.01
COL12A1-201ENST00000322507 HLA-DQA1P01909 254 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 GP1BAP07359 652 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 TBC1D26Q86UD7 250 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 C12orf76Q8N812 135 aaPredicted RBP8.71□□□□□ -1.01
COL12A1-201ENST00000322507 FAM71CQ8NEG0 241 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 SMIM4Q8WVI0 70 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 HCFC2Q9Y5Z7 792 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 ANKRD55Q3KP44 614 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 FBLN7Q53RD9 439 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 AMBRA1Q9C0C7 1298 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 PRSS50Q9UI38 385 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 FUT6P51993 359 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 RPS19BP1Q86WX3 136 aaKnown RBP8.71□□□□□ -1.01
COL12A1-201ENST00000322507 OR2I1PQ8NGU4 316 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF355PQ9NSJ1 428 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 SLAMF8Q9P0V8 285 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 ICAM5Q9UMF0 924 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 A1L4Q6 167 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 HMX2A2RU54 273 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 FRG2CA6NGY1 282 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF716A6NP11 495 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 GEMIN2O14893 280 aaKnown RBP8.71□□□□□ -1.01
COL12A1-201ENST00000322507 TCTN1Q2MV58 587 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 TMEM128Q5BJH2 165 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 GLDNQ6ZMI3 551 aaPredicted RBP8.71□□□□□ -1.01
COL12A1-201ENST00000322507 ANKRD37Q7Z713 158 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 D2HGDHQ8N465 521 aa8.71□□□□□ -1.01
COL12A1-201ENST00000322507 RCL1Q9Y2P8 373 aaKnown RBP8.71□□□□□ -1.01
COL12A1-201ENST00000322507 SLC35E3Q7Z769 313 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 GALMQ96C23 342 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 OCIAD1Q9NX40 245 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 CDX4O14627 284 aaPredicted RBP8.71□□□□□ -1.02
COL12A1-201ENST00000322507 PLPP7Q8NBV4 271 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 MYLKQ15746 1914 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 ETHE1O95571 254 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 PRDX4Q13162 271 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 LGALSLQ3ZCW2 172 aaPredicted RBP8.71□□□□□ -1.02
COL12A1-201ENST00000322507 TNFRSF1AP19438 455 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 CADP27708 2225 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 TNFRSF9Q07011 255 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 DLEU7Q6UYE1 221 aa8.71□□□□□ -1.02
COL12A1-201ENST00000322507 CPEB2Q7Z5Q1 589 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms