RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 HTR1AP08908 422 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 ZNF728P0DKX0 622 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 ZNF19P17023 458 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 OR12D2P58182 307 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 RAB40BQ12829 278 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 MED21Q13503 144 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 TMEM244Q5VVB8 128 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 OR2G2Q8NGZ5 317 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 FBLIM1Q8WUP2 373 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 APH1BQ8WW43 257 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 SGCDQ92629 289 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 ALG8Q9BVK2 526 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 PKIBQ9C010 78 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 Q9H521 79 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 AMBNQ9NP70 447 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 ABCB10Q9NRK6 738 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 DSCAML1Q8TD84 2053 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 FAM90A22PA8MWA6 464 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 CHRM2P08172 466 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 IGHV1-8P0DP01 117 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 KIR3DL2P43630 455 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 CD83Q01151 205 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 IL24Q13007 206 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 GALEQ14376 348 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 SSX2Q16385 188 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 KLHL22Q53GT1 634 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 PLA1AQ53H76 456 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 FOXB2Q5VYV0 432 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 Q6ZS46 218 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 TCF23Q7RTU1 214 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 C8orf59Q8N0T1 100 aaPredicted RBP11.43□□□□□ -0.58
RPP40-201ENST00000319533 SYS1Q8N2H4 156 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 SETD9Q8NE22 299 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 CNIH3Q8TBE1 160 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 C10orf35Q96D05 121 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 C4orf36Q96KX1 117 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 OCSTAMPQ9BR26 566 aa11.43□□□□□ -0.58
RPP40-201ENST00000319533 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
RPP40-201ENST00000319533 IRGMA1A4Y4 181 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 WBP4O75554 376 aaKnown RBP11.42□□□□□ -0.58
RPP40-201ENST00000319533 IGHA1P01876 353 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 PIPP12273 146 aaPredicted RBP11.42□□□□□ -0.58
RPP40-201ENST00000319533 ZNF20P17024 532 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 CCR9P51686 369 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 BLCAPP62952 87 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 COL10A1Q03692 680 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 MEF2CQ06413 473 aaPredicted RBP11.42□□□□□ -0.58
RPP40-201ENST00000319533 MRPL28Q13084 256 aaKnown RBP11.42□□□□□ -0.58
RPP40-201ENST00000319533 IL18R1Q13478 541 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 MINOS1Q5TGZ0 78 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 LHFPL3Q86UP9 236 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 EGFL6Q8IUX8 553 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 TRMT10AQ8TBZ6 339 aaKnown RBP11.42□□□□□ -0.58
RPP40-201ENST00000319533 PP6455Q8WZ26 134 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 CHST5Q9GZS9 411 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 ERVK13-1Q9NX77 482 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 FRRS1LQ9P0K9 344 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 OR14J1Q9UGF5 321 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 MYRFQ9Y2G1 1151 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 MINOS1-NBL1R4GNA1 71 aa11.42□□□□□ -0.58
RPP40-201ENST00000319533 RYR3Q15413 4870 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 FAM230AA0A1W2PPH8 454 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 ALDOBP05062 364 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 ISG15P05161 165 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 RPSAP08865 295 aaKnown RBP11.41□□□□□ -0.58
RPP40-201ENST00000319533 OCM2P0CE71 109 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 OCMP0CE72 109 aaPredicted RBP11.41□□□□□ -0.58
RPP40-201ENST00000319533 FUT6P51993 359 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 SMN1Q16637 294 aaKnown RBP11.41□□□□□ -0.58
RPP40-201ENST00000319533 ANGPTL5Q86XS5 388 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 RDH10Q8IZV5 341 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 OR8H2Q8N162 312 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 HAVCR2Q8TDQ0 301 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 PELI1Q96FA3 418 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 SNX22Q96L94 193 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
RPP40-201ENST00000319533 HHLA2Q9UM44 414 aa11.41□□□□□ -0.58
RPP40-201ENST00000319533 F8VVB4 439 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 F8VWA3 439 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 AZGP1P25311 298 aaKnown RBP11.4□□□□□ -0.58
RPP40-201ENST00000319533 VDAC2P45880 294 aaPredicted RBP11.4□□□□□ -0.58
RPP40-201ENST00000319533 GBX2P52951 348 aaPredicted RBP11.4□□□□□ -0.58
RPP40-201ENST00000319533 NANOS3P60323 173 aaKnown RBP11.4□□□□□ -0.58
RPP40-201ENST00000319533 ALKBH1Q13686 389 aaKnown RBP11.4□□□□□ -0.58
RPP40-201ENST00000319533 UBE2V2Q15819 145 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 GDPD3Q7L5L3 318 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 ASCC1Q8N9N2 400 aaKnown RBP11.4□□□□□ -0.58
RPP40-201ENST00000319533 OR13C3Q8NGS6 347 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 BORCS8Q96FH0 119 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 ZNF714Q96N38 554 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 OR5M11Q96RB7 305 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 MTCH1Q9NZJ7 389 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 SESN1Q9Y6P5 492 aa11.4□□□□□ -0.58
RPP40-201ENST00000319533 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms