RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 HIKESHIQ53FT3 197 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 DYNLRB2Q8TF09 96 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 ZNF501Q96CX3 271 aaPredicted RBP12.61□□□□□ -0.39
TRIM25-201ENST00000316881 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
TRIM25-201ENST00000316881 TMEM231Q9H6L2 316 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 J3QT63 122 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 PJVKQ0ZLH3 352 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 CD96P40200 585 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 ERVFC1-1P60608 527 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 KCNMB1Q16558 191 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 ZNF770Q6IQ21 691 aaPredicted RBP12.61□□□□□ -0.39
TRIM25-201ENST00000316881 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 FFAR4Q5NUL3 377 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
TRIM25-201ENST00000316881 C17orf47Q8NEP4 570 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 TRBV5-3A0A0A0MS03 114 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 GNG7O60262 68 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 LYZP61626 148 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 P2RY6Q15077 328 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 LSMEM1Q8N8F7 131 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 CABLES2Q9BTV7 478 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
TRIM25-201ENST00000316881 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 TEX261Q6UWH6 196 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 THSD4Q6ZMP0 1018 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 C10orf111Q8N326 155 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 RELL2Q8NC24 303 aaPredicted RBP12.6□□□□□ -0.39
TRIM25-201ENST00000316881 OR1A1Q9P1Q5 309 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 NPTNQ9Y639 398 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 U3KQ87 197 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 IGHV3-13P01766 116 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 ACSM4P0C7M7 580 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 LPAR2Q9HBW0 351 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 ZNF586Q9NXT0 402 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 PPIAL4EA0A075B759 164 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 RFPL4AA6NLU0 287 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 PPIAL4DF5H284 164 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 RFPL4AL1F8VTS6 287 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 PPIAL4FP0DN26 164 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 C10orf90Q96M02 699 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 RNF2Q99496 336 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 NAA60Q9H7X0 242 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 CNTD2Q9H8S5 307 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 PPIAL4AQ9Y536 164 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 NKX2-8O15522 239 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 ONECUT2O95948 504 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 IGHA1P01876 353 aa12.6□□□□□ -0.39
TRIM25-201ENST00000316881 TRDCB7Z8K6 153 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 WISP3O95389 354 aaPredicted RBP12.59□□□□□ -0.39
TRIM25-201ENST00000316881 C1QL3Q5VWW1 255 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 PILRBQ9UKJ0 227 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 PYCARD-AS1I3L0S3 204 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 BCL2L11O43521 198 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 ADRB1P08588 477 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 FA2HQ7L5A8 372 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 WDR89Q96FK6 387 aaPredicted RBP12.59□□□□□ -0.39
TRIM25-201ENST00000316881 UCN2Q96RP3 112 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 B3GALNT1O75752 331 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 SFT2D2O95562 160 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 ETFDHQ16134 617 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 TMPRSS13Q9BYE2 586 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 SLC25A22Q9H936 323 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 SCO1O75880 301 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 OPN1MWP04001 364 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 OPN1MW2P0DN77 364 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 OPN1MW3P0DN78 364 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 AMTP48728 403 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 MESTQ5EB52 335 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 SPRED2Q7Z698 418 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 OR5A2Q8NGI9 324 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 SLC2A8Q9NY64 477 aa12.59□□□□□ -0.39
TRIM25-201ENST00000316881 A0A1W2PPV9 198 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 FOXS1O43638 330 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 ZNF205O95201 554 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 WNT1P04628 370 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 PDZK1IP1Q13113 114 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 LRRTM1Q86UE6 522 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 OR1L1Q8NH94 360 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 PCGF1Q9BSM1 259 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 RSRP1Q9BUV0 290 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 CA11O75493 328 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 CTAG2O75638 210 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 DEFA6Q01524 100 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 AANATQ16613 207 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.58□□□□□ -0.4
TRIM25-201ENST00000316881 FHL5Q5TD97 284 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 MDP1Q86V88 176 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 MTFP1Q9UDX5 166 aa12.58□□□□□ -0.4
TRIM25-201ENST00000316881 SF3B6Q9Y3B4 125 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms