RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CELA3BP08861 270 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 EIF2S3P41091 472 aaKnown RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF616Q08AN1 781 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF345Q14585 488 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 HSPB2Q16082 182 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 KCNMB1Q16558 191 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 TAF9Q16594 264 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 SP6Q3SY56 376 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 AVPI1Q5T686 147 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 PGAP1Q75T13 922 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 C5orf24Q7Z6I8 188 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 MYPOPQ86VE0 399 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 RPRMLQ8N4K4 120 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 GLYATL2Q8WU03 294 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 AQP3Q92482 292 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 TAAR6Q96RI8 345 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 NIT2Q9NQR4 276 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF71Q9NQZ8 489 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 SH3BGRL2Q9UJC5 107 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 RHBDD3Q9Y3P4 386 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 TACC2O95359 2948 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 SPTAN1Q13813 2472 aaKnown RBP6.57□□□□□ -1.36
TRIM55-202ENST00000315962 IGKV1-27A0A075B6S5 117 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 A0A1W2PPH5 198 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 M0R036 132 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 DHRS3O75911 302 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 FAM157CP0CG43 387 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 SLC25A4P12235 298 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 EDN3P14138 238 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 FSTP19883 344 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 DUSP1P28562 367 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 FOXF2Q12947 444 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 HABP2Q14520 560 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-202ENST00000315962 CLINT1Q14677 625 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 FAM209BQ5JX69 171 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 DHRS11Q6UWP2 260 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 DOK3Q7L591 496 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 P4HA3Q7Z4N8 544 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 C6orf201Q7Z4U5 140 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 LYPD6Q86Y78 171 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 OR51T1Q8NGJ9 327 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 CPT1CQ8TCG5 803 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 RNF141Q8WVD5 230 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 WDYHV1Q96HA8 205 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 BIN3Q9NQY0 253 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 SLC17A5Q9NRA2 495 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 ZFP57Q9NU63 452 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 COL6A6A6NMZ7 2263 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 IGKV1D-8A0A087WSZ0 117 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 MEGF11A6BM72 1044 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 LDLRAD4O15165 306 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 NR2C1P13056 603 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 HOXA1P49639 335 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-202ENST00000315962 RRADP55042 308 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM50BP56557 158 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 SUPT4H1P63272 117 aaKnown RBP6.57□□□□□ -1.36
TRIM55-202ENST00000315962 PEA15Q15121 130 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 CRIP3Q6Q6R5 217 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 Q6ZRG5 221 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 S100A13Q99584 98 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM59Q9BXS4 323 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 OR10A2Q9H208 303 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 TNRC6AQ8NDV7 1962 aaKnown RBP6.57□□□□□ -1.36
TRIM55-202ENST00000315962 ESPL1Q14674 2120 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 KIAA2026Q5HYC2 2103 aa6.57□□□□□ -1.36
TRIM55-202ENST00000315962 A0A0A6YYH2 397 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 A6NJ64 397 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF850A8MQ14 1090 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 PRSS44E7EML9 344 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CDC14BO60729 498 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 AGFG2O95081 481 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NXPH3O95157 252 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 SNAPINO95295 136 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 DIRAS3O95661 229 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CEACAM1P13688 526 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NQO2P16083 231 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 AMY2BP19961 511 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 CRYGSP22914 178 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 BLVRBP30043 206 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 ERVS71-1P61550 626 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 PIGYQ3MUY2 71 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NCMAPQ5T1S8 102 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM178AQ8NBL3 297 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 OR5T2Q8NGG2 359 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 SULT4A1Q9BR01 284 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 PAPOLGQ9BWT3 736 aaKnown RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 LPAR5Q9H1C0 372 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 EHFQ9NZC4 300 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 FZR1Q9UM11 496 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 PTPRQQ9UMZ3 2332 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 RNASEK-C17orf49H0YIS7 233 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 NDUFS6O75380 124 aaKnown RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 DUS4LO95620 317 aaKnown RBP6.56□□□□□ -1.36
TRIM55-202ENST00000315962 IL18BPO95998 194 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 GSK3AP49840 483 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 S100A12P80511 92 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 QRFPP83859 136 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 PJVKQ0ZLH3 352 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 MEF2DQ14814 521 aa6.56□□□□□ -1.36
TRIM55-202ENST00000315962 RAB35Q15286 201 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms