RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ZNF93P35789 620 aaPredicted RBP6.53□□□□□ -1.36
CDC42-201ENST00000315554 CAPZA1P52907 286 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 ERVK11-1P61568 191 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 GPR50Q13585 617 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 KCNJ8Q15842 424 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 CR1LQ2VPA4 569 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 HSD17B12Q53GQ0 312 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 FAHD2BQ6P2I3 314 aaPredicted RBP6.53□□□□□ -1.36
CDC42-201ENST00000315554 ZNF788Q6ZQV5 615 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 OR8H3Q8N146 312 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 ZNRF1Q8ND25 227 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 TMEM185AQ8NFB2 350 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 H1FXQ92522 213 aaKnown RBP6.53□□□□□ -1.36
CDC42-201ENST00000315554 MUL1Q969V5 352 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 FAHD2AQ96GK7 314 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 NR1H4Q96RI1 486 aaPredicted RBP6.53□□□□□ -1.36
CDC42-201ENST00000315554 UQCC2Q9BRT2 126 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 HES4Q9HCC6 221 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 TMEM138Q9NPI0 162 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 NDUFB11Q9NX14 153 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 RASL12Q9NYN1 266 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 OR5V1Q9UGF6 321 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 GSTK1Q9Y2Q3 226 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 MAB21L2Q9Y586 359 aa6.53□□□□□ -1.36
CDC42-201ENST00000315554 MALRD1Q5VYJ5 2156 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 LOC105371242A0A075B767 164 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 A0A1W2PP11 408 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 A0A1W2PPH5 198 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 MEX3AA1L020 520 aaKnown RBP6.52□□□□□ -1.37
CDC42-201ENST00000315554 SMIM30A4D0T7 59 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 A8MXK9 166 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 SIRPB1O00241 398 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 CCRL2O00421 344 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 NDUFB3O43676 98 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 NDUFA2O43678 99 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 GPX5O75715 221 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 SC5DO75845 299 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 KDM4BO94953 1096 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 ALX3O95076 343 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 HTR3BO95264 441 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 FSTL3O95633 263 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 ALDOBP05062 364 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 ACAA1P09110 424 aaPredicted RBP6.52□□□□□ -1.37
CDC42-201ENST00000315554 UCHL1P09936 223 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 NDUFB7P17568 137 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 GABRA5P31644 462 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 PTGFRP43088 359 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 DVL1P1P54792 670 aaPredicted RBP6.52□□□□□ -1.37
CDC42-201ENST00000315554 IL13RA1P78552 427 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 COL10A1Q03692 680 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 SCN1BQ07699 218 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 DCAF12L2Q5VW00 463 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 SLC36A1Q7Z2H8 476 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 LRRTM1Q86UE6 522 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 FAM58AQ8N1B3 248 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 ASCC1Q8N9N2 400 aaKnown RBP6.52□□□□□ -1.37
CDC42-201ENST00000315554 FCGR1BQ92637 280 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 C12orf43Q96C57 262 aaKnown RBP6.52□□□□□ -1.37
CDC42-201ENST00000315554 KCNK15Q9H427 330 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 ZNF696Q9H7X3 374 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 CNTD2Q9H8S5 307 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 EXOSC4Q9NPD3 245 aaKnown RBP6.52□□□□□ -1.37
CDC42-201ENST00000315554 ZNF581Q9P0T4 197 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 FOXJ3Q9UPW0 622 aa6.52□□□□□ -1.37
CDC42-201ENST00000315554 HIVEP2P31629 2446 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 FN1P02751 2386 aaKnown RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 A0A087WXM4 84 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 SIGLEC5O15389 551 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 HAND1O96004 215 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 KNG1P01042 644 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 SRMP19623 302 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 SERPINA2P20848 420 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 PRB3Q04118 309 aaPredicted RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 RSU1Q15404 277 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 PIGYQ3MUY2 71 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 LRRC10Q5BKY1 277 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 FAM120AOSQ5T036 256 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 ATPAF1Q5TC12 328 aaPredicted RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 C22orf42Q6IC83 251 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 GLIPR1L1Q6UWM5 242 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 PRR18Q8N4B5 295 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 PNLDC1Q8NA58 520 aaKnown RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 OR4M1Q8NGD0 313 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 OR4D6Q8NGJ1 314 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 SDSLQ96GA7 329 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 GFI1Q99684 422 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 CHST6Q9GZX3 395 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 METTL9Q9H1A3 318 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 OR51E2Q9H255 320 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 RNF167Q9H6Y7 350 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 HMG20AQ9NP66 347 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 ING3Q9NXR8 418 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 KAAG1Q9UBP8 84 aa6.51□□□□□ -1.37
CDC42-201ENST00000315554 SLC25A10Q9UBX3 287 aaPredicted RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 MRPS28Q9Y2Q9 187 aaKnown RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 AK6Q9Y3D8 172 aaKnown RBP6.51□□□□□ -1.37
CDC42-201ENST00000315554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.5□□□□□ -1.373e-7■■■□□ 16.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms