RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TRIM64BA6NI03 449 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 LRRC3CA6NJW4 275 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 INHBBP09529 407 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 ATF4P18848 351 aaPredicted RBP11.88□□□□□ -0.51
DDX54-202ENST00000314045 RAB11AP62491 216 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 CEACAM21Q3KPI0 293 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 RBMXL1Q96E39 390 aaKnown RBP11.88□□□□□ -0.51
DDX54-202ENST00000314045 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
DDX54-202ENST00000314045 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 CYB5BO43169 146 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 ADAM20O43506 726 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 COX5BP10606 129 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 FOXO1Q12778 655 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 MS4A5Q9H3V2 200 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 NARFLQ9H6Q4 476 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 LIPGQ9Y5X9 500 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 PPIHO43447 177 aaKnown RBP11.87□□□□□ -0.51
DDX54-202ENST00000314045 ADRB1P08588 477 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 KCNJ3P48549 501 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 KLF9Q13886 244 aaPredicted RBP11.87□□□□□ -0.51
DDX54-202ENST00000314045 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 NHLRC1Q6VVB1 395 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 Q6ZT83 130 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 FAM213BQ8TBF2 198 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 HELZP42694 1942 aaKnown RBP11.87□□□□□ -0.51
DDX54-202ENST00000314045 M0R1X1 148 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 LHX2P50458 406 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 AKR1C1Q04828 323 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 TCTE3Q8IZS6 198 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 SLC25A38Q96DW6 304 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 PIK3IP1Q96FE7 263 aa11.87□□□□□ -0.51
DDX54-202ENST00000314045 PRSS44E7EML9 344 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 AQP7O14520 342 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 HAND1O96004 215 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PRF1P14222 555 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 TLE1Q04724 770 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 OR5D13Q8NGL4 314 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 MED30Q96HR3 178 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PRDM14Q9GZV8 571 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 LPAR5Q9H1C0 372 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PARD6AQ9NPB6 346 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 DFFBO76075 338 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 KRASP01116 189 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 CLDN18P56856 261 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 Q0VFX4 171 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 RTL8BQ17RB0 113 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 OR1S2Q8NGQ3 325 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 GSX2Q9BZM3 304 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PRO3102Q9H379 93 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 DOPEY2Q9Y3R5 2298 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 TRAV39A0A0B4J263 110 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 C1orf174Q8IYL3 243 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 RGP1Q92546 391 aaPredicted RBP11.86□□□□□ -0.51
DDX54-202ENST00000314045 RNF7Q9UBF6 113 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 PURGQ9UJV8 347 aaKnown RBP11.86□□□□□ -0.51
DDX54-202ENST00000314045 LAMP3Q9UQV4 416 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 IGHV3-43A0A0B4J1X8 118 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 TRAV38-1A0A0B4J264 116 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 CRHP06850 196 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 IGHV3-43DP0DP04 118 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
DDX54-202ENST00000314045 CHRNB4P30926 498 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 ZNF816Q0VGE8 651 aaPredicted RBP11.86□□□□□ -0.51
DDX54-202ENST00000314045 C19orf48Q6RUI8 117 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 RAB1BQ9H0U4 201 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 GCM1Q9NP62 436 aa11.86□□□□□ -0.51
DDX54-202ENST00000314045 ESPL1Q14674 2120 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 C9orf170A2RU37 121 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 E5RGE8 158 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 SSSCA1O60232 199 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 CNIH1O95406 144 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 SFT2D2O95562 160 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 BAXQ07812 192 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 VWA1Q6PCB0 445 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 WDYHV1Q96HA8 205 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 ZNF107Q9UII5 783 aaPredicted RBP11.85□□□□□ -0.51
DDX54-202ENST00000314045 NSG2Q9Y328 171 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 hADV38S2A0JD32 116 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 TMEM210A6NLX4 147 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 DHRS7CA6NNS2 312 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 B8ZZF3 427 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 ID4P47928 161 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 RPS16P62249 146 aaKnown RBP11.85□□□□□ -0.51
DDX54-202ENST00000314045 NKX6-1P78426 367 aaPredicted RBP11.85□□□□□ -0.51
DDX54-202ENST00000314045 EFNB1P98172 346 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 FAM3AP98173 230 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 UBE2V2Q15819 145 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 GABRA6Q16445 453 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 PEAR1Q5VY43 1037 aaPredicted RBP11.85□□□□□ -0.51
DDX54-202ENST00000314045 SSX8Q7RTT4 187 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 LILRB4Q8NHJ6 448 aa11.85□□□□□ -0.51
DDX54-202ENST00000314045 ZCCHC14Q8WYQ9 949 aaKnown RBP11.85□□□□□ -0.51
DDX54-202ENST00000314045 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
DDX54-202ENST00000314045 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms