RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 T-ENOLP0DO92 83 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 HOXC5Q00444 222 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 PSG5Q15238 335 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TEX44Q53QW1 395 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 RGMBQ6NW40 437 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TCF23Q7RTU1 214 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC35E3Q7Z769 313 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 SMIM20Q8N5G0 67 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 C8orf31Q8N9H6 132 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 RAX2Q96IS3 184 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC25A10Q9UBX3 287 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 MYBPHLA2RUH7 354 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 OR11H12B2RN74 326 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 F6UB75 175 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 WNT9AO14904 365 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 VENTXO95231 258 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 CRPP02741 224 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 CYBAP13498 195 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 FOLR2P14207 255 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 POU3F3P20264 500 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 SELENOPP49908 381 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 SURF2Q15527 256 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 UBE2V2Q15819 145 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 OR11H1Q8NG94 326 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 GPR150Q8NGU9 434 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 OR11H2Q8NH07 326 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 NMNAT3Q96T66 252 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 PAXXQ9BUH6 204 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 IL36AQ9UHA7 158 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TEX22C9J3V5 150 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 C11orf94C9JXX5 98 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 ALDOAP04075 364 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 EPXP11678 715 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 EGR1P18146 543 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TACR2P21452 398 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 CDKN2AP42771 156 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 HBA1P69905 142 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 DEFB134Q4QY38 66 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 ZADH2Q8N4Q0 377 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 PPP1R1CQ8WVI7 109 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 PP6455Q8WZ26 134 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TLCD1Q96CP7 247 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 MS4A3Q96HJ5 214 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 UMODP07911 640 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 HOXA5P20719 270 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 AQP6Q13520 282 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TMEM255AQ5JRV8 349 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 GDF6Q6KF10 455 aaPredicted RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 MEPCEQ7L2J0 689 aaKnown RBP6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 TSGA13Q96PP4 275 aa6.82□□□□□ -1.32
LIMCH1-201ENST00000313860 FPR2P25090 351 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 FAM189BP81408 668 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 MRGPRGQ86SM5 289 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 HAPLN4Q86UW8 402 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 PIGZQ86VD9 579 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SOSTQ9BQB4 213 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 ABHD16BQ9H3Z7 469 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 HRASLS2Q9NWW9 162 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 IDSB3KWA1 339 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 VEGFDO43915 354 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 MPZL1O95297 269 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 IGHG1P01857 330 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 APELAP0DMC3 54 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 GZMHP20718 246 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 OPRM1P35372 400 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 KIR2DS4P43632 304 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 P2RY6Q15077 328 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 Q6ZNX1 250 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 OR5R1Q8NH85 324 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 FUBP1Q96AE4 644 aaKnown RBP6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 MS4A4EQ96PG1 132 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 NAA38Q9BRA0 125 aaKnown RBP6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 MYH10P35580 1976 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 RNF225M0QZC1 329 aaPredicted RBP6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 CD8AP01732 235 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 HPXP02790 462 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 ADRA1AP35348 466 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 ASIPP42127 132 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC38A11Q08AI6 406 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SMIM21Q3B7S5 101 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 CCSMST1Q4G0I0 132 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SHISA6Q6ZSJ9 500 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SLC37A2Q8TED4 501 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 RDH5Q92781 318 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SLCO4A1Q96BD0 722 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 C2orf50Q96LR7 162 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 NTPCRQ9BSD7 190 aaKnown RBP6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 C1QTNF3Q9BXJ4 246 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 CDC42EP3Q9UKI2 254 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SPATA31A5Q5VU36 1347 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 SPATA31A3Q5VYP0 1347 aa6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 MED1Q15648 1581 aaPredicted RBP6.81□□□□□ -1.32
LIMCH1-201ENST00000313860 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms