RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 RAB37Q96AX2 223 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 A0A1W2PPC4 97 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 ZC3H12DA2A288 527 aaKnown RBP13.82□□□□□ -0.2
HCFC1-201ENST00000310441 FAM221AA4D161 298 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 FABP2P12104 132 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 C12orf54Q6X4T0 127 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 TRAV38-1A0A0B4J264 116 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 A0A1W2PNR3 127 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 SFT2D2O95562 160 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 TM4SF4P48230 202 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 OR4D10Q8NGI6 311 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 OR10V1Q8NGI7 309 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 VAX2Q9UIW0 290 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 TMEM272A0A1B0GTI8 110 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 ZNF77Q15935 545 aa13.82□□□□□ -0.2
HCFC1-201ENST00000310441 TRDCB7Z8K6 153 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 CIRBPQ14011 172 aaKnown RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 MAMSTRQ6ZN01 415 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 FAM219AQ8IW50 185 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 TEX29Q8N6K0 151 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 ACTL6AO96019 429 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 SLC37A1P57057 533 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 SMAD4Q13485 552 aaKnown RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 PRSS54Q6PEW0 395 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 RIMKLAQ8IXN7 391 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 LRRC3BQ96PB8 259 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 LRRK1Q38SD2 2015 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 LMO7DNF2Z398 122 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 PPIHO43447 177 aaKnown RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 PDCD6O75340 191 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 PPP1CCP36873 323 aaKnown RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 CLEC12BQ2HXU8 276 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 SPNS3Q6ZMD2 512 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 ALKBH3Q96Q83 286 aaPredicted RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 ZGRF1Q86YA3 2104 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 THADAQ6YHU6 1953 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 A0A0A6YYD5 115 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 ZBTB42B2RXF5 422 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 CD40P25942 277 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 CAMPP49913 170 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 LGALSLQ3ZCW2 172 aaPredicted RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 TMEM251Q8N6I4 163 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 NFAM1Q8NET5 270 aaPredicted RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 RSG1Q9BU20 258 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 TRGV5A0A0B4J1U4 118 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 CA5BP1Q8WTZ4 195 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 PRR14Q9BWN1 585 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 RNF167Q9H6Y7 350 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
HCFC1-201ENST00000310441 UPK1AO00322 258 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 APCSP02743 223 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 PTOV1Q86YD1 416 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 ASB16Q96NS5 453 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 M0R296 226 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 MRGPRX1Q96LB2 322 aa13.81□□□□□ -0.2
HCFC1-201ENST00000310441 LYZP61626 148 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 CST9Q5W186 159 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SLC35E3Q7Z769 313 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 ARHGAP5-AS1Q96IT6 56 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 MED29Q9NX70 200 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TRAV34A0A0B4J273 112 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 CTAG2O75638 210 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 HLA-DRB5Q30154 266 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 MRGPREQ86SM8 312 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SLC26A1Q9H2B4 701 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TBX21Q9UL17 535 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TRGV8A0A0C4DH27 118 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 RER1O15258 196 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 FCGR3BO75015 233 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
HCFC1-201ENST00000310441 ADIPOQQ15848 244 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 CEACAM16Q2WEN9 425 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 FAM78BQ5VT40 261 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 RNF165Q6ZSG1 346 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SLC25A42Q86VD7 318 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SLC25A22Q9H936 323 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 HRO43593 1189 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 COL5A1-AS1Q5SY13 56 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 STARD4Q96DR4 205 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 MARVELD1Q9BSK0 173 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 MTCH2Q9Y6C9 303 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 AKR7A2O43488 359 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 B4GALT3O60512 393 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 CDC14BO60729 498 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TIAL1Q01085 375 aaKnown RBP eCLIP13.8□□□□□ -0.2
HCFC1-201ENST00000310441 ZNF273Q14593 569 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 BSXQ3C1V8 233 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 BCL7CQ8WUZ0 217 aaPredicted RBP13.8□□□□□ -0.2
HCFC1-201ENST00000310441 RAB1CQ92928 201 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 PRNDQ9UKY0 176 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TCRBV5S2A0A599 114 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TBX19O60806 448 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
HCFC1-201ENST00000310441 SYT8Q8NBV8 401 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 MZB1Q8WU39 189 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 FOXB1Q99853 325 aa13.8□□□□□ -0.2
HCFC1-201ENST00000310441 TMPRSS13Q9BYE2 586 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms