RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 GALP22466 123 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 SHBQ15464 509 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ACER2Q5QJU3 275 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 CPEB3Q8NE35 698 aaKnown RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 NT5CQ8TCD5 201 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 RGP1Q92546 391 aaPredicted RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 ABHD1Q96SE0 405 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 PRSS50Q9UI38 385 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 A4GNTQ9UNA3 340 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 MSRB2Q9Y3D2 182 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 A0A1B0GTL3 188 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ASPDHA6ND91 283 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 B4DEV8 164 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ACAA2P42765 397 aaKnown RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 PTGFRP43088 359 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 KRTCAP3Q53RY4 240 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 FAM219BQ5XKK7 198 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ZNF880Q6PDB4 577 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ZDHHC23Q8IYP9 409 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 OR2C3Q8N628 320 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 OR10G4Q8NGN3 311 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 RND1Q92730 232 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 NEIL1Q96FI4 390 aaPredicted RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 ARHGAP5-AS1Q96IT6 56 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 B9D1Q9UPM9 204 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 FGF17O60258 216 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ETHE1O95571 254 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 IGHA1P01876 353 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 HPXP02790 462 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 CSN3P07498 182 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 HIST3H3Q16695 136 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 TGIF2LXQ8IUE1 241 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 TMEM230Q96A57 120 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 TBX15Q96SF7 602 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 LRP12Q9Y561 859 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 C3orf85A0A1B0GTC6 90 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 LRRC3CA6NJW4 275 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 ICOSLGO75144 302 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 FAHP16930 419 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 UBE2V2Q15819 145 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 RAB40CQ96S21 281 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 GPX7Q96SL4 187 aaPredicted RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 ADAT1Q9BUB4 502 aaKnown RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 C20orf141Q9NUB4 165 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 KIAA1456Q9P272 454 aa7.27□□□□□ -1.25
VPS41-202ENST00000310301 RP1L1Q8IWN7 2480 aaPredicted RBP7.27□□□□□ -1.25
VPS41-202ENST00000310301 FBLL1A6NHQ2 334 aaKnown RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 ADAM11O75078 769 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 RHBDL1O75783 438 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 DYNLT3P51808 116 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 NSUN5P2Q63ZY6 315 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 SSX8Q7RTT4 187 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 SLC25A45Q8N413 288 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 OR11G2Q8NGC1 345 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 OR10AD1Q8NGE0 317 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 LILRB1Q8NHL6 650 aaPredicted RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 RAB24Q969Q5 203 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 TIMD4Q96H15 378 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 SRD5A3Q9H8P0 318 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 SIRT7Q9NRC8 400 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 SLC6A13Q9NSD5 602 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 CACFD1Q9UGQ2 172 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 SPAG17Q6Q759 2223 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 MGAMO43451 1857 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 UPK1AO00322 258 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 CBR3O75828 277 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 F12P00748 615 aaPredicted RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 ZNF385CQ66K41 422 aaPredicted RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 BPIFA4PQ86YQ2 179 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 ROBO4Q8WZ75 1007 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 EXOGQ9Y2C4 368 aaKnown RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 H3BQ15 152 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 BSGP35613 385 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 MRGPREQ86SM8 312 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 ZNF738Q8NE65 137 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 GALMQ96C23 342 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 POM121L2Q96KW2 1035 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 MFNGO00587 321 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 PRSS1P07477 247 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 FGF5P12034 268 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 HIST1H1DP16402 221 aaKnown RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 THBS4P35443 961 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 PPICP45877 212 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 TCL1AP56279 114 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 BTG2P78543 158 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 PRDX4Q13162 271 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 OR1L4Q8NGR5 311 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 OR2T6Q8NHC8 308 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 AKIRIN1Q9H9L7 192 aaPredicted RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 ADAP1O75689 374 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 OR5AC1P0C628 307 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 CD22P20273 847 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 S100A4P26447 101 aaKnown RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 DCAF10Q5QP82 559 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 NUFIP2Q7Z417 695 aaKnown RBP7.26□□□□□ -1.25
VPS41-202ENST00000310301 CAMKMTQ7Z624 323 aa7.26□□□□□ -1.25
VPS41-202ENST00000310301 CA13Q8N1Q1 262 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms