RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 P2RX3P56373 397 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 SCN1BQ07699 218 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 GALEQ14376 348 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 C11orf88Q6PI97 169 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 C10orf67Q8IYJ2 551 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 NDNFQ8TB73 568 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 Q96MT0 163 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 SLC29A1Q99808 456 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 ZCCHC4Q9H5U6 513 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 SEBOXQ9HB31 216 aaPredicted RBP15.77■□□□□ 0.12
LIME1-201ENST00000309546 PCDHGB5Q9Y5G0 923 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 HILPDAQ9Y5L2 63 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 IGHV2-26A0A0B4J1V2 119 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 F2RL2O00254 374 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 SH2D1BO14796 132 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 KDM4BO94953 1096 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 FADS2O95864 444 aaKnown RBP15.76■□□□□ 0.11
LIME1-201ENST00000309546 OR2H2O95918 312 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 ZNF44P15621 663 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 JUNBP17275 347 aaPredicted RBP15.76■□□□□ 0.11
LIME1-201ENST00000309546 ZBTB49Q6ZSB9 765 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 SYS1Q8N2H4 156 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 TSEN15Q8WW01 171 aaKnown RBP15.76■□□□□ 0.11
LIME1-201ENST00000309546 COMMD4Q9H0A8 199 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 TMEM133Q9H2Q1 129 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 S100A14Q9HCY8 104 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 ERVK13-1Q9NX77 482 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 ING3Q9NXR8 418 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 KIAA2026Q5HYC2 2103 aa15.76■□□□□ 0.11
LIME1-201ENST00000309546 MEGF11A6BM72 1044 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 MT-ND2P03891 347 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 SLC34A1Q06495 639 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 HABP2Q14520 560 aaPredicted RBP15.75■□□□□ 0.11
LIME1-201ENST00000309546 PRAMEF5Q5TYX0 476 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 LPCAT4Q643R3 524 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 CCBE1Q6UXH8 406 aaPredicted RBP15.75■□□□□ 0.11
LIME1-201ENST00000309546 C1QL4Q86Z23 238 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 PQLC1Q8N2U9 271 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 CLEC7AQ9BXN2 247 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 ZNF702PQ9H963 129 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 PITPNC1Q9UKF7 332 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 DHDHQ9UQ10 334 aa15.75■□□□□ 0.11
LIME1-201ENST00000309546 UBE2J1Q9Y385 318 aaPredicted RBP15.75■□□□□ 0.11
LIME1-201ENST00000309546 TRGV10A0A0A0MS01 117 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 LOC100130705A0A1B0GUX0 176 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 FAM172BPA6NC97 362 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 A6NDX4 124 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 TMEM212A6NML5 194 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 E9PI62 339 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 MMP23AO75900 390 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 ZFPL1O95159 310 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 TMEM225BP0DP42 221 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 ERP29P30040 261 aaKnown RBP15.74■□□□□ 0.11
LIME1-201ENST00000309546 GBX2P52951 348 aaPredicted RBP15.74■□□□□ 0.11
LIME1-201ENST00000309546 RAB40BQ12829 278 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 ARSJQ5FYB0 599 aaPredicted RBP15.74■□□□□ 0.11
LIME1-201ENST00000309546 MINOS1Q5TGZ0 78 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 DTX3Q8N9I9 347 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 OR52I1Q8NGK6 324 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 OR5AK2Q8NH90 309 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 RHOXF1Q8NHV9 184 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 PDCD1LG2Q9BQ51 273 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 GAL3ST2Q9H3Q3 398 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 INPP5EQ9NRR6 644 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 FAM118AQ9NWS6 357 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 MINOS1-NBL1R4GNA1 71 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 VWFP04275 2813 aa15.74■□□□□ 0.11
LIME1-201ENST00000309546 FUOMA2VDF0 154 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 SULT1B1O43704 296 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 CCDC159P0C7I6 412 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 AESQ08117 197 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 IL18R1Q13478 541 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 BAIAP2L2Q6UXY1 529 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 SERPINA12Q8IW75 414 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 SAXO1Q8IYX7 474 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 OR5D14Q8NGL3 314 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 CDCA4Q9BXL8 241 aa15.73■□□□□ 0.11
LIME1-201ENST00000309546 RPL36Q9Y3U8 105 aaKnown RBP15.73■□□□□ 0.11
LIME1-201ENST00000309546 BAG2O95816 211 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 CDK2P24941 298 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 HTR1DP28221 377 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 GLIPR1P48060 266 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 ZP1P60852 638 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 MRPL28Q13084 256 aaKnown RBP15.72■□□□□ 0.11
LIME1-201ENST00000309546 ATXN7L3Q14CW9 347 aaPredicted RBP15.72■□□□□ 0.11
LIME1-201ENST00000309546 KISS1Q15726 138 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 APH1BQ8WW43 257 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 ZNF649Q9BS31 505 aa15.72■□□□□ 0.11
LIME1-201ENST00000309546 EBAG9O00559 213 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 HSPB6O14558 160 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 DEGS1O15121 323 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 PEX14O75381 377 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 FBXO24O75426 580 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 SOX2P48431 317 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 DYNLT3P51808 116 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 GTF2A1P52655 376 aaPredicted RBP15.71■□□□□ 0.11
LIME1-201ENST00000309546 KLHL22Q53GT1 634 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 KRBOX4Q5JUW0 171 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 ZNF691Q5VV52 312 aa15.71■□□□□ 0.11
LIME1-201ENST00000309546 OR52W1Q6IF63 320 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms