RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SHPKQ9UHJ6 478 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 OPN4Q9UHM6 478 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 ITGB1BP2Q9UKP3 347 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 MGAT4AQ9UM21 535 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 AKAP13Q12802 2813 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 SVILO95425 2214 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 OR5H14A6NHG9 310 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 G3V3Q6 166 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 DLL1O00548 723 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 SDCBPO00560 298 aaPredicted RBP9.02□□□□□ -0.97
CLP1-201ENST00000302731 GOSR2O14653 212 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 TIMM8AO60220 97 aaPredicted RBP9.02□□□□□ -0.97
CLP1-201ENST00000302731 CRYAAP02489 173 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 PPP3CBP16298 524 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 BMP5P22003 454 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 GLRXP35754 106 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 NPY4RP50391 375 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 H2BFSP57053 126 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 IKZF1Q13422 519 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 SPIN3Q5JUX0 258 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 SHEQ5VZ18 495 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 LIN54Q6MZP7 749 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 RGS7BPQ6MZT1 257 aaPredicted RBP9.02□□□□□ -0.97
CLP1-201ENST00000302731 ASCC1Q8N9N2 400 aaKnown RBP9.02□□□□□ -0.97
CLP1-201ENST00000302731 OR11H4Q8NGC9 324 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 OR5M8Q8NGP6 311 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 NRIP2Q9BQI9 281 aa9.02□□□□□ -0.97
CLP1-201ENST00000302731 KIR2DS1A0A191URI9 304 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 MLNRO43193 412 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 RHBDL1O75783 438 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 SFT2D2O95562 160 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 CTSDP07339 412 aaPredicted RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 ZNF250P15622 560 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 AKR1C4P17516 323 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 MDH2P40926 338 aaKnown RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 KIR2DS4P43632 304 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 UCP3P55916 312 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 NKX6-1P78426 367 aaPredicted RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 KIR2DS1Q14954 304 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 ZNF146Q15072 292 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 PDCD1Q15116 288 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 C11orf88Q6PI97 169 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 POC1AQ8NBT0 407 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 ADAD2Q8NCV1 583 aaKnown RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 TMEM230Q96A57 120 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 ZNF2Q9BSG1 426 aaPredicted RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 RTBDNQ9BSG5 229 aaPredicted RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 HES4Q9HCC6 221 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 Q9N2K0 584 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 PLSCR3Q9NRY6 295 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 TINAGQ9UJW2 476 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 C14orf166Q9Y224 244 aaKnown RBP9.01□□□□□ -0.97
CLP1-201ENST00000302731 BOLA1Q9Y3E2 137 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 HSPB11Q9Y547 144 aa9.01□□□□□ -0.97
CLP1-201ENST00000302731 DBX1A6NMT0 343 aa9□□□□□ -0.97
CLP1-201ENST00000302731 C1QTNF9BB2RNN3 333 aa9□□□□□ -0.97
CLP1-201ENST00000302731 EEF1E1-BLOC1S5C9J1V9 151 aa9□□□□□ -0.97
CLP1-201ENST00000302731 C16orf97H3BN30 126 aa9□□□□□ -0.97
CLP1-201ENST00000302731 H7C1Q1 480 aa9□□□□□ -0.97
CLP1-201ENST00000302731 M0R1B8 84 aa9□□□□□ -0.97
CLP1-201ENST00000302731 CDIPTO14735 213 aa9□□□□□ -0.97
CLP1-201ENST00000302731 PTBP3O95758 552 aaKnown RBP9□□□□□ -0.97
CLP1-201ENST00000302731 CD8AP01732 235 aa9□□□□□ -0.97
CLP1-201ENST00000302731 IGHV3-13P01766 116 aa9□□□□□ -0.97
CLP1-201ENST00000302731 CTXN2P0C2S0 81 aa9□□□□□ -0.97
CLP1-201ENST00000302731 VAMP1P23763 118 aa9□□□□□ -0.97
CLP1-201ENST00000302731 FABP6P51161 128 aa9□□□□□ -0.97
CLP1-201ENST00000302731 ZNF83P51522 516 aa9□□□□□ -0.97
CLP1-201ENST00000302731 SEC61A1P61619 476 aaKnown RBP9□□□□□ -0.97
CLP1-201ENST00000302731 FGL1Q08830 312 aa9□□□□□ -0.97
CLP1-201ENST00000302731 FAM27E3Q08E93 113 aa9□□□□□ -0.97
CLP1-201ENST00000302731 KLRB1Q12918 225 aa9□□□□□ -0.97
CLP1-201ENST00000302731 C2orf68Q2NKX9 166 aa9□□□□□ -0.97
CLP1-201ENST00000302731 Q5BKY6 102 aa9□□□□□ -0.97
CLP1-201ENST00000302731 LY6G6FQ5SQ64 297 aa9□□□□□ -0.97
CLP1-201ENST00000302731 Q6P435 159 aa9□□□□□ -0.97
CLP1-201ENST00000302731 BRICD5Q6PL45 260 aa9□□□□□ -0.97
CLP1-201ENST00000302731 SLC22A25Q6T423 547 aa9□□□□□ -0.97
CLP1-201ENST00000302731 FIP1L1Q6UN15 594 aaKnown RBP9□□□□□ -0.97
CLP1-201ENST00000302731 SUMF2Q8NBJ7 301 aa9□□□□□ -0.97
CLP1-201ENST00000302731 UXS1Q8NBZ7 420 aa9□□□□□ -0.97
CLP1-201ENST00000302731 DYRK2Q92630 601 aa9□□□□□ -0.97
CLP1-201ENST00000302731 ZNF488Q96MN9 340 aa9□□□□□ -0.97
CLP1-201ENST00000302731 VKORC1Q9BQB6 163 aa9□□□□□ -0.97
CLP1-201ENST00000302731 CHIAQ9BZP6 476 aa9□□□□□ -0.97
CLP1-201ENST00000302731 CLEC4MQ9H2X3 399 aaPredicted RBP9□□□□□ -0.97
CLP1-201ENST00000302731 CHMP1AQ9HD42 196 aaPredicted RBP9□□□□□ -0.97
CLP1-201ENST00000302731 IL36RNQ9UBH0 155 aa9□□□□□ -0.97
CLP1-201ENST00000302731 ASPMQ8IZT6 3477 aa9□□□□□ -0.97
CLP1-201ENST00000302731 SPTBN2O15020 2390 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 PTPRQQ9UMZ3 2332 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 IGLV3-9A0A075B6K5 115 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 TRAV24A0A0B4J272 114 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 PLSCR5A0PG75 271 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 H0YL77 283 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 DEGS1O15121 323 aa8.99□□□□□ -0.97
CLP1-201ENST00000302731 SLC34A2O95436 690 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms