RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CA6P23280 308 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 RTL6Q6ICC9 239 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 ZNF561Q8N587 486 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 OR2C3Q8N628 320 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 DMBX1Q8NFW5 382 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 OR10D3Q8NH80 312 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 PHYHIPLQ96FC7 376 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 USB1Q9BQ65 265 aaKnown RBP11.65□□□□□ -0.54
CASC4-201ENST00000299957 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 GPR132Q9UNW8 380 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 C5orf63A6NC05 138 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 IGKV3-11P04433 115 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 DCAF12Q5T6F0 453 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 LRRC75AQ8NAA5 344 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 ERGIC1Q969X5 290 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 ZNF501Q96CX3 271 aaPredicted RBP11.65□□□□□ -0.54
CASC4-201ENST00000299957 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 NAA60Q9H7X0 242 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 IFT22Q9H7X7 185 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 PATZ1Q9HBE1 687 aaKnown RBP11.65□□□□□ -0.54
CASC4-201ENST00000299957 TUBG2Q9NRH3 451 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 CCL28Q9NRJ3 127 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 FAM206AQ9NX38 181 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 SPG11Q96JI7 2443 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 PLXNA3P51805 1871 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 FIGNL2A6NMB9 653 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 FTCDNL1E5RQL4 147 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 GLULP15104 373 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 PTGER4P35408 488 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 THBS4P35443 961 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.55
CASC4-201ENST00000299957 RAB5CP51148 216 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 TMEM50BP56557 158 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 RAB1AP62820 205 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 CLN3Q13286 438 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 PNLIPRP3Q17RR3 467 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 UQCC3Q6UW78 93 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 APH1AQ96BI3 265 aa11.65□□□□□ -0.55
CASC4-201ENST00000299957 BOKQ9UMX3 212 aaPredicted RBP11.65□□□□□ -0.55
CASC4-201ENST00000299957 A0A0J9YW62 118 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 A8MXK9 166 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 SCGB1D1O95968 90 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 IL34Q6ZMJ4 242 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 ZNF429Q86V71 674 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 HOGA1Q86XE5 327 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 D2HGDHQ8N465 521 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 DMRTA2Q96SC8 542 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 ENY2Q9NPA8 101 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 H0YIZ8 118 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 MMP9P14780 707 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 PLPPR5Q32ZL2 321 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 AQP3Q92482 292 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 UTP23Q9BRU9 249 aaKnown RBP11.64□□□□□ -0.55
CASC4-201ENST00000299957 HSF4Q9ULV5 492 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 CHST1O43916 411 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 FHL1Q13642 323 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 ZNF787Q6DD87 383 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 GAPTQ8N292 157 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 LAMP3Q9UQV4 416 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 FNDC1Q4ZHG4 1894 aaPredicted RBP11.64□□□□□ -0.55
CASC4-201ENST00000299957 TRPM7Q96QT4 1865 aa11.64□□□□□ -0.55
CASC4-201ENST00000299957 IGHV3-43A0A0B4J1X8 118 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 ATXN7O15265 892 aaPredicted RBP11.63□□□□□ -0.55
CASC4-201ENST00000299957 IGHV3-43DP0DP04 118 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 CXorf66Q5JRM2 361 aaPredicted RBP11.63□□□□□ -0.55
CASC4-201ENST00000299957 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 OR4F4Q96R69 305 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 SLC26A1Q9H2B4 701 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 SLC7A10Q9NS82 523 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 GFOD1Q9NXC2 390 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 GHRLQ9UBU3 117 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 DENND4CQ5VZ89 1909 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 C3orf85A0A1B0GTC6 90 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
CASC4-201ENST00000299957 CBR3O75828 277 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 TEX30Q5JUR7 227 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.63□□□□□ -0.55
CASC4-201ENST00000299957 OR10V1Q8NGI7 309 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 OR52M1Q8NGK5 317 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 RARRES2Q99969 163 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 SMIM7Q9BQ49 75 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 NMES1Q9C002 83 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 SULT1A1P50225 295 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 DYNLT3P51808 116 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 PDLIM3Q53GG5 364 aaPredicted RBP11.63□□□□□ -0.55
CASC4-201ENST00000299957 C1orf100Q5SVJ3 147 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 SMRP1Q8NCR6 262 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
CASC4-201ENST00000299957 PIEZO2Q9H5I5 2752 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 A0A1W2PQD3 144 aa11.62□□□□□ -0.55
CASC4-201ENST00000299957 SPINK4O60575 86 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms