RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 OR5P3Q8WZ94 311 aa18.23■□□□□ 0.51
SOX17-201ENST00000297316 RTBDNQ9BSG5 229 aaPredicted RBP18.23■□□□□ 0.51
SOX17-201ENST00000297316 IGLV1-44P01699 117 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 CALCRP30988 508 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 RAB14P61106 215 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 OPCMLQ14982 345 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 EIF2S3LQ2VIR3 472 aaKnown RBP18.22■□□□□ 0.51
SOX17-201ENST00000297316 C22orf34Q6ZV56 151 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 PEG10Q86TG7 708 aaKnown RBP18.22■□□□□ 0.51
SOX17-201ENST00000297316 Q8NFD4 153 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 ELMOD3Q96FG2 381 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 FZR1Q9UM11 496 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 PDCD6O75340 191 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 SCO1O75880 301 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 ZNF205O95201 554 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 M6PRP20645 277 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 PSG7Q13046 419 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 GSX2Q9BZM3 304 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 LIME1Q9H400 295 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 ANXA10Q9UJ72 324 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 ZNF835Q9Y2P0 537 aa18.22■□□□□ 0.51
SOX17-201ENST00000297316 IGHV3-64DA0A0J9YX35 117 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 OR7C1O76099 320 aaPredicted RBP18.21■□□□□ 0.51
SOX17-201ENST00000297316 HOXD4P09016 255 aaPredicted RBP18.21■□□□□ 0.51
SOX17-201ENST00000297316 FPR2P25090 351 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 ZNF83P51522 516 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 AANATQ16613 207 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 FAHD2BQ6P2I3 314 aaPredicted RBP18.21■□□□□ 0.51
SOX17-201ENST00000297316 SLC38A6Q8IZM9 456 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 OR5A2Q8NGI9 324 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 FAHD2AQ96GK7 314 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 MARS2Q96GW9 593 aaKnown RBP18.21■□□□□ 0.51
SOX17-201ENST00000297316 ZNF488Q96MN9 340 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 MICU1Q9BPX6 476 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 TMPRSS13Q9BYE2 586 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 PRR13Q9NZ81 148 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 TRAV14DV4A0A0A6YYC5 116 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 A8MXE2 369 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 RRASP10301 218 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 SORDQ00796 357 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 KLF14Q8TD94 323 aaPredicted RBP18.21■□□□□ 0.51
SOX17-201ENST00000297316 HIST1H2AAQ96QV6 131 aa18.21■□□□□ 0.51
SOX17-201ENST00000297316 IGHV2OR16-5A0A0B4J2B6 119 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 PPP3CBP16298 524 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 GLRA1P23415 457 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 HAGHLQ6PII5 290 aaPredicted RBP18.2■□□□□ 0.5
SOX17-201ENST00000297316 ADGRG4Q8IZF6 3080 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 CACNA1AO00555 2505 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 MCRIP1C9JLW8 97 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 SUPT4H1P63272 117 aaKnown RBP18.2■□□□□ 0.5
SOX17-201ENST00000297316 TMEM17Q86X19 198 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 SEC22AQ96IW7 307 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 NUP50Q9UKX7 468 aa18.2■□□□□ 0.5
SOX17-201ENST00000297316 FXYD6-FXYD2A0A087WZ82 144 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 B8ZZF3 427 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 J3QW42 95 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 L7N2F9 121 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 NFYAP23511 347 aaPredicted RBP18.19■□□□□ 0.5
SOX17-201ENST00000297316 DTYMKP23919 212 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 ZNF660Q6AZW8 331 aaPredicted RBP18.19■□□□□ 0.5
SOX17-201ENST00000297316 ELP2Q6IA86 826 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 KCTD9Q7L273 389 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 TMEM185AQ8NFB2 350 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 ZNF2Q9BSG1 426 aaPredicted RBP18.19■□□□□ 0.5
SOX17-201ENST00000297316 FXYD6Q9H0Q3 95 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 AMDHD2Q9Y303 409 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 MPC1Q9Y5U8 109 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 NBASA2RRP1 2371 aa18.19■□□□□ 0.5
SOX17-201ENST00000297316 H0YL77 283 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 ARPC5O15511 151 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 DUS4LO95620 317 aaKnown RBP18.18■□□□□ 0.5
SOX17-201ENST00000297316 FUT3P21217 361 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 FGF12P61328 243 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 SEC61A1P61619 476 aaKnown RBP18.18■□□□□ 0.5
SOX17-201ENST00000297316 SMUG1Q53HV7 270 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 TMEM128Q5BJH2 165 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 WDR86Q86TI4 376 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 TMEM200AQ86VY9 491 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 SAXO1Q8IYX7 474 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 PHB2Q99623 299 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 OBP2BQ9NPH6 170 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 PCDHB16Q9NRJ7 776 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 M0R1B8 84 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 RGS11O94810 467 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 RAC2P15153 192 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 SELEP16581 610 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 C4BPBP20851 252 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 DUSP1P28562 367 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 TAS2R31P59538 309 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 SLC9A3R2Q15599 337 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 TIMM23BQ5SRD1 257 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 EDARQ9UNE0 448 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 SHANK1Q9Y566 2161 aa18.18■□□□□ 0.5
SOX17-201ENST00000297316 ITPR1Q14643 2758 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 LOC105371267A0A1B0GV96 52 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 RHBDL1O75783 438 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 FABP6P51161 128 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 CLEC18BQ6UXF7 455 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 UNQ6494/PRO21346Q6UXR6 183 aa18.17■□□□□ 0.5
SOX17-201ENST00000297316 C5orf24Q7Z6I8 188 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms