RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 KIR2DS2P43631 304 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 EFNB2P52799 333 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 LSM6P62312 80 aaKnown RBP9.75□□□□□ -0.85
PBRM1-201ENST00000296302 LSM11P83369 360 aaKnown RBP eCLIP9.75□□□□□ -0.85
PBRM1-201ENST00000296302 OR10AC1Q8NH08 325 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 ECM29Q5VYK3 1845 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 HEXAP06865 529 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 TSPO2Q5TGU0 170 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 C17orf78Q8N4C9 275 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 C11orf42Q8N5U0 333 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 FAM181AQ8N9Y4 354 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 SARAFQ96BY9 339 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 DEFB127Q9H1M4 99 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 GNB4Q9HAV0 340 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 PROCRQ9UNN8 238 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 PTP4A3O75365 173 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 CFDP00746 253 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-201ENST00000296302 MMP16P51512 607 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 DSPPQ9NZW4 1301 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 A0A1B0GTQ1 180 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 OR5B21A6NL26 309 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 TRDCB7Z8K6 153 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 PDE6DO43924 150 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 FCGR3BO75015 233 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 F12P00748 615 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-201ENST00000296302 PPYP01298 95 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 NHLRC3Q5JS37 347 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 HOGA1Q86XE5 327 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 PRSS3P2Q8NHM4 247 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 RNF2Q99496 336 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 ZFP64Q9NPA5 681 aa9.75□□□□□ -0.85
PBRM1-201ENST00000296302 MPTX1A8MV57 137 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 OR5AL1P0C617 328 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 VMA21Q3ZAQ7 101 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 ZNF362Q5T0B9 420 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 LILRB1Q8NHL6 650 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 RGP1Q92546 391 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 SLC22A20A6NK97 555 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 M0R2Z0 102 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 SLC25A5P05141 298 aaKnown RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 PGA4P0DJD7 388 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 PGA5P0DJD9 388 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 GLULP15104 373 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 HTR1DP28221 377 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 TMEM97Q5BJF2 176 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 ACSM6Q6P461 480 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 ZADH2Q8N4Q0 377 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 RNF133Q8WVZ7 376 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 STARD4Q96DR4 205 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 TBX21Q9UL17 535 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 ADAMTSL3P82987 1691 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 ATP6V0CP27449 155 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 RAB7AP51149 207 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 SLC35E3Q7Z769 313 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 TMEM230Q96A57 120 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 MSL2Q9HCI7 577 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 RCC2Q9P258 522 aaKnown RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 BMPR1BO00238 502 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 GALNSP34059 522 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 LIMS1P48059 325 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 LBX1P52954 281 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 PABPC1L2AQ5JQF8 200 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 VAX1Q5SQQ9 334 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 TMEM211Q6ICI0 200 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 LYZL2Q7Z4W2 148 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 TIMD4Q96H15 378 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 ZNF552Q9H707 407 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 KLK13Q9UKR3 277 aa9.74□□□□□ -0.85
PBRM1-201ENST00000296302 SIPA1L3O60292 1781 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-201ENST00000296302 PITX3O75364 302 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 CCL11P51671 97 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 CD226Q15762 336 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 H1FOOQ8IZA3 346 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-201ENST00000296302 OR5D13Q8NGL4 314 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 OR2T6Q8NHC8 308 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 OR2D2Q9H210 308 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 PSG11Q9UQ72 335 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 SCN1AP35498 2009 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 ABCA3Q99758 1704 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 KNL1Q8NG31 2342 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 ZFC3H1O60293 1989 aaKnown RBP9.73□□□□□ -0.85
PBRM1-201ENST00000296302 A0A1B0GU03 582 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 RPL11P62913 178 aaKnown RBP9.73□□□□□ -0.85
PBRM1-201ENST00000296302 COL19A1Q14993 1142 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 SPATA46Q5T0L3 261 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 ZNF880Q6PDB4 577 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 LILRA6Q6PI73 481 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 CARFQ8N187 725 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 OR1L4Q8NGR5 311 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 UBALD1Q8TB05 177 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 GPBAR1Q8TDU6 330 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 SMCHD1A6NHR9 2005 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 MYOGP15173 224 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 HOXA6P31267 233 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 NANOS3P60323 173 aaKnown RBP9.73□□□□□ -0.85
PBRM1-201ENST00000296302 TMEM240Q5SV17 173 aa9.73□□□□□ -0.85
PBRM1-201ENST00000296302 COL5A1-AS1Q5SY13 56 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms