RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZFHX4Q86UP3 3567 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 LRP3O75074 770 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 SLC2A9Q9NRM0 540 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 KCNIP3Q9Y2W7 256 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 A0A1W2PR80 420 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 K7EPK0 472 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 SLC33A1O00400 549 aaPredicted RBP13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 RRP8O43159 456 aaKnown RBP13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 ACTL6AO96019 429 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 AADACP22760 399 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 HERV-K104P61576 105 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 FAM71E2Q8N5Q1 922 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 FGF23Q9GZV9 251 aaPredicted RBP13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 DNTTIP1Q9H147 329 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF552Q9H707 407 aaPredicted RBP13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF732B4DXR9 585 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 GPR31O00270 319 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 LILRA1O75019 489 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 CA11O75493 328 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF883P0CG24 379 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 TSC22D1Q15714 1073 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 SPIN3Q5JUX0 258 aa13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 MRPS18CQ9Y3D5 142 aaKnown RBP13.61□□□□□ -0.23
NCKIPSD-201ENST00000294129 DMXL1Q9Y485 3027 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 LAMA5O15230 3695 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 TERTO14746 1132 aaKnown RBP13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 FUT3P21217 361 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 DTYMKP23919 212 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 RPL12P30050 165 aaKnown RBP13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 GLP1RP43220 463 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 SPEM2Q0P670 501 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF528Q3MIS6 628 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 SLC30A7Q8NEW0 376 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 OR10Z1Q8NGY1 313 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 STOML3Q8TAV4 291 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 RNF141Q8WVD5 230 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 HPSE2Q8WWQ2 592 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 EXTL1Q92935 676 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 TMEM45BQ96B21 275 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 CNTNAP3BQ96NU0 1288 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 AQP10Q96PS8 301 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 GPR87Q9BY21 358 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 CNTNAP3Q9BZ76 1288 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 SLC5A7Q9GZV3 580 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 NAA60Q9H7X0 242 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 TREM1Q9NP99 234 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF391Q9UJN7 358 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 CEP250Q9BV73 2442 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 F12P00748 615 aaPredicted RBP13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 HKR1P10072 659 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 ID4P47928 161 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 PIGMQ9H3S5 423 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 CACNA1DQ01668 2161 aa13.6□□□□□ -0.23
NCKIPSD-201ENST00000294129 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 IGKV3D-15A0A087WSY6 115 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 PMP22Q01453 160 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 HAGHLQ6PII5 290 aaPredicted RBP13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 SECTM1Q8WVN6 248 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 TSNAXQ99598 290 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 FBXL17Q9UF56 701 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 C21orf140B9A014 251 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 ABCD4O14678 606 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 NDUFA2O43678 99 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 SYNGR1O43759 233 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 ASCL4Q6XD76 172 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 CCDC36Q8IYA8 594 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZDHHC23Q8IYP9 409 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 C17orf78Q8N4C9 275 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 SUMF1Q8NBK3 374 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 RIF1Q5UIP0 2472 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 CACNA1GO43497 2377 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 MED6O75586 246 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 SP1P08047 785 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 ECI1P42126 302 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 ASCL1P50553 236 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 IL15RAQ13261 267 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 DAZAP2Q15038 168 aaPredicted RBP13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 NSUN5P2Q63ZY6 315 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 DHRS11Q6UWP2 260 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 LINC00518Q8N0U6 118 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 OR52M1Q8NGK5 317 aa13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 BSCL2Q96G97 398 aaPredicted RBP13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 REPIN1Q9BWE0 567 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-201ENST00000294129 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 HS3ST1O14792 307 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 NXPH3O95157 252 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 PLP2Q04941 152 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 PRRX2Q99811 253 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 SPTBN2O15020 2390 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 GVINP1Q7Z2Y8 2422 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 ATG12O94817 140 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 MBPP02686 304 aaPredicted RBP13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 SCTP09683 121 aa13.58□□□□□ -0.24
NCKIPSD-201ENST00000294129 TMEM33P57088 247 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms