RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PIK3IP1Q96FE7 263 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 SLC2A9Q9NRM0 540 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 ICAM5Q9UMF0 924 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 ZNHIT1O43257 154 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 SMIM21Q3B7S5 101 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 STUMQ69YW2 141 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 JMJD6Q6NYC1 403 aaPredicted RBP13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 TCF21O43680 179 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 ZNF273Q14593 569 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 MRGPRDQ8TDS7 321 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 ATP5SQ99766 215 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 EGLN1Q9GZT9 426 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 TMEM9BQ9NQ34 198 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 PDCD6O75340 191 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 CTSDP07339 412 aaPredicted RBP13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 P2RY1P47900 373 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 VWA1Q6PCB0 445 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 POM121L2Q96KW2 1035 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 LYRM2Q9NU23 88 aaPredicted RBP13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 H3BQ15 152 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 FOXL2P58012 376 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 ADAT3Q96EY9 351 aaPredicted RBP13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 VSTM2LQ96N03 204 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 KIAA1456Q9P272 454 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 GCM2O75603 506 aaPredicted RBP13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 GNG3P63215 75 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 GAPTQ8N292 157 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 ANXA10Q9UJ72 324 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 TNFSF18Q9UNG2 199 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 MYO16Q9Y6X6 1858 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 CRYAAP02489 173 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 TCTEX1D1Q8N7M0 179 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 NKX2-6A6NCS4 301 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 LAIR2Q6ISS4 152 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 LILRA6Q6PI73 481 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 FA2HQ7L5A8 372 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 OR10AD1Q8NGE0 317 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 OR5AC2Q9NZP5 309 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 R4GN57 208 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 IGKV1D-16P01601 117 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 RBP4P02753 201 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 MUC1P15941 1255 aaPredicted RBP13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 IL11P20809 199 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 B2MP61769 119 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 RGS7BPQ6MZT1 257 aaPredicted RBP13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 OVCH2Q7RTZ1 564 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 TNFSF15O95150 251 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 SLC25A5P05141 298 aaKnown RBP13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 ADH4P08319 380 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 OPRK1P41145 380 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 KIR3DL2P43630 455 aa13.53□□□□□ -0.24
SHROOM4-201ENST00000289292 TRAV39A0A0B4J263 110 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 MFSD2BA6NFX1 497 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 OR1C1Q15619 314 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 OR11H4Q8NGC9 324 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 OR10D3Q8NH80 312 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 NAT8Q9UHE5 227 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 VSIG8P0DPA2 414 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 FAHD2BQ6P2I3 314 aaPredicted RBP13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 GPBAR1Q8TDU6 330 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 FAHD2AQ96GK7 314 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 Q9N2K0 584 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 GPR27Q9NS67 375 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 PAM16Q9Y3D7 125 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 GOLT1BQ9Y3E0 138 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 NINQ8N4C6 2090 aa13.52□□□□□ -0.24
SHROOM4-201ENST00000289292 CAMPP49913 170 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 EDARADDQ8WWZ3 215 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 PTPRFP10586 1907 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 DEFB109BQ30KR1 87 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 Q5BKY6 102 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 FAM162BQ5T6X4 162 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 TGIF2LXQ8IUE1 241 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 TMEM204Q9BSN7 226 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 GHITMQ9H3K2 345 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 SCN3AQ9NY46 2000 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 SFTPA2Q8IWL1 248 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
SHROOM4-201ENST00000289292 OR3A1P47881 315 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 NHLH1Q02575 133 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 NHLH2Q02577 135 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 SKP2Q13309 424 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 LYG1Q8N1E2 194 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 C7orf66A4D0T2 115 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 NMBP08949 121 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 CCKARP32238 428 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 DEGS2Q6QHC5 323 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 LIAT1Q6ZQX7 453 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 MOB3BQ86TA1 216 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 KMT5CQ86Y97 462 aa13.51□□□□□ -0.25
SHROOM4-201ENST00000289292 PHF7Q9BWX1 381 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms