RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 HIVEP3Q5T1R4 2406 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 RELNP78509 3460 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 SYNGR3O43761 229 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 PNPP00491 289 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 SNRPEP62304 92 aaKnown RBP16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 MFGE8Q08431 387 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 RAB35Q15286 201 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 RHOUQ7L0Q8 258 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 ZNF561Q8N587 486 aa16.65■□□□□ 0.26
CDC42EP2-201ENST00000279249 A0A1W2PR80 420 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 MFNGO00587 321 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 RSPO1Q2MKA7 263 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 C1orf100Q5SVJ3 147 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 ASPHD2Q6ICH7 369 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 ZNF704Q6ZNC4 412 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 BHLHA15Q7RTS1 189 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 WDR31Q8NA23 367 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 KCNK15Q9H427 330 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 TUBA4BQ9H853 241 aa16.64■□□□□ 0.25
CDC42EP2-201ENST00000279249 A0A0B4J2A0 478 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 LOC390937A0A1W2PQ73 354 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 METTL21EPA6NDL7 271 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 OR6C6A6NF89 314 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 ZNF705EA8MWA4 302 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 S100A6P06703 90 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 ZFP82Q8N141 532 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 CPEB3Q8NE35 698 aaKnown RBP16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 TMED6Q8WW62 240 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 AQP10Q96PS8 301 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 SHPKQ9UHJ6 478 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 DIDO1Q9BTC0 2240 aaKnown RBP16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 SCGNO76038 276 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 F12P00748 615 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 CD5P06127 495 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 AGAP20933 346 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 CRYGSP22914 178 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 ANOS1P23352 680 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 NKAIN3Q8N8D7 197 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 OR1F12Q8NHA8 337 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 PRR7Q8TB68 274 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 NUDT16L1Q9BRJ7 211 aaKnown RBP16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 RNF126Q9BV68 326 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 SELENOIQ9C0D9 397 aa16.63■□□□□ 0.25
CDC42EP2-201ENST00000279249 RNASEK-C17orf49H0YIS7 233 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 MT-ND4LP03901 98 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 DBHP09172 617 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 MUC1P15941 1255 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 RCC1P18754 421 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 NFYBP25208 207 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 OTX1P32242 354 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 RAB1AP62820 205 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 GRB2P62993 217 aaKnown RBP16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 FAM27E3Q08E93 113 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 KRTAP27-1Q3LI81 207 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 GLYATL3Q5SZD4 288 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 TMEM244Q5VVB8 128 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 ZNF600Q6ZNG1 722 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 MDP1Q86V88 176 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 PLPP7Q8NBV4 271 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 MRGPRFQ96AM1 343 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 FAM206AQ9NX38 181 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 DNAJB11Q9UBS4 358 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 R4GMQ9 66 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 TRAV20A0A0B4J274 112 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 TAAR5O14804 337 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 CCKARP32238 428 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 PRSS54Q6PEW0 395 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 DPPA2Q7Z7J5 298 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 C17orf78Q8N4C9 275 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 ASB5Q8WWX0 329 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 NANOS1Q8WY41 292 aaKnown RBP16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 PPP1R14AQ96A00 147 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 KPTNQ9Y664 436 aa16.62■□□□□ 0.25
CDC42EP2-201ENST00000279249 C5orf51A6NDU8 294 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 FBXO24O75426 580 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 SFTA3P0C7M3 94 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 HSD11B1P28845 292 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 ARR3P36575 388 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 SERPINF1P36955 418 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 HTR5AP47898 357 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 GSK3AP49840 483 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 HGFACQ04756 655 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 ZNF260Q3ZCT1 412 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 SLC16A13Q7RTY0 426 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 CATSPERDQ86XM0 798 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 ZSCAN4Q8NAM6 433 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 NIT2Q9NQR4 276 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 G6PC2Q9NQR9 355 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 RAB22AQ9UL26 194 aa16.61■□□□□ 0.25
CDC42EP2-201ENST00000279249 SSX5O60225 188 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 ERCC1P07992 297 aaPredicted RBP16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 CHRNB4P30926 498 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 UBE2NP61088 152 aaKnown RBP16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 CDSNQ15517 529 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 OR10K2Q6IF99 312 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 NAA40Q86UY6 237 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 OR10R2Q8NGX6 335 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 HIST1H2BAQ96A08 127 aa16.6■□□□□ 0.25
CDC42EP2-201ENST00000279249 S100PBPQ96BU1 408 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms