RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 GABARAPL3Q9BY60 117 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 GAL3ST2Q9H3Q3 398 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 NEK6Q9HC98 313 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 NECAP2Q9NVZ3 263 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 IMPAD1Q9NX62 359 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 OAZ3Q9UMX2 235 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 GSTK1Q9Y2Q3 226 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 UBE2J1Q9Y385 318 aaPredicted RBP10.25□□□□□ -0.77
CD44-203ENST00000278386 PCDHGB5Q9Y5G0 923 aa10.25□□□□□ -0.77
CD44-203ENST00000278386 IGKV1-9A0A0C4DH69 117 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 MMP23AO75900 390 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 PF4P02776 101 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 HTR1AP08908 422 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 TMED1Q13445 227 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 ZNF146Q15072 292 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 OR52W1Q6IF63 320 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 C16orf82Q7Z2V1 217 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 OR5AU1Q8NGC0 362 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 OR5D18Q8NGL1 313 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 OR13C3Q8NGS6 347 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 OR13C9Q8NGT0 318 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 OR2G2Q8NGZ5 317 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 ZNF596Q8TC21 504 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 WIPF2Q8TF74 440 aaPredicted RBP10.24□□□□□ -0.77
CD44-203ENST00000278386 FGGYQ96C11 551 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 SPACA5Q96QH8 159 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 AURKAIP1Q9NWT8 199 aaPredicted RBP10.24□□□□□ -0.77
CD44-203ENST00000278386 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
CD44-203ENST00000278386 DAPL1A0PJW8 107 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 SH2D1BO14796 132 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 OR2H2O95918 312 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 ZNF44P15621 663 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 CDK2P24941 298 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 CD24P25063 80 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 ERP29P30040 261 aaKnown RBP10.23□□□□□ -0.77
CD44-203ENST00000278386 BRS3P32247 399 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 RASSF2P50749 326 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 ISL1P61371 349 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 SCN1BQ07699 218 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 BNIP1Q12981 228 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 PDZK1IP1Q13113 114 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 BAIAP2L2Q6UXY1 529 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 UTS2BQ765I0 119 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 ABHD12Q8N2K0 398 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 STMN2Q93045 179 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 SPSB1Q96BD6 273 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 RNFT2Q96EX2 444 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 SEBOXQ9HB31 216 aaPredicted RBP10.23□□□□□ -0.77
CD44-203ENST00000278386 HMG20AQ9NP66 347 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 DPM3Q9P2X0 92 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 ORC6Q9Y5N6 252 aa10.23□□□□□ -0.77
CD44-203ENST00000278386 CIB2O75838 187 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 ALX3O95076 343 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 PTGFRP43088 359 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 LOXL3P58215 753 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 AESQ08117 197 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 RBM39Q14498 530 aaKnown RBP10.22□□□□□ -0.77
CD44-203ENST00000278386 KPNB1Q14974 876 aaKnown RBP10.22□□□□□ -0.77
CD44-203ENST00000278386 ATXN7L3Q14CW9 347 aaPredicted RBP10.22□□□□□ -0.77
CD44-203ENST00000278386 ABCA11PQ4W5N1 156 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 C9orf152Q5JTZ5 239 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 CCDC121Q6ZUS5 278 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 CENPVQ7Z7K6 275 aaPredicted RBP10.22□□□□□ -0.77
CD44-203ENST00000278386 RTN4RL2Q86UN3 420 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 OR4D6Q8NGJ1 314 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 OR10AC1Q8NH08 325 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 CENPNQ96H22 339 aaPredicted RBP10.22□□□□□ -0.77
CD44-203ENST00000278386 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 FRRS1LQ9P0K9 344 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.22□□□□□ -0.77
CD44-203ENST00000278386 HHLA2Q9UM44 414 aa10.22□□□□□ -0.77
CD44-203ENST00000278386 TCRBV4S1A1TA0A5B7 111 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 SH2D7A6NKC9 451 aaPredicted RBP10.21□□□□□ -0.77
CD44-203ENST00000278386 FAM90A22PA8MWA6 464 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 LEUTXA8MZ59 168 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 TOR1AO14656 332 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 SLC16A6O15403 523 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 ISG15P05161 165 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 LPLP06858 475 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 HCKP08631 526 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 IGLL1P15814 213 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 CEACAM3P40198 252 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 OR3A4PP47883 348 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 GLIPR1P48060 266 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 NANOS3P60323 173 aaKnown RBP10.21□□□□□ -0.77
CD44-203ENST00000278386 BDH1Q02338 343 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 KRBOX4Q5JUW0 171 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 FOXB2Q5VYV0 432 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 OR51A4Q8NGJ6 313 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 C4orf36Q96KX1 117 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 MBOAT4Q96T53 435 aa10.21□□□□□ -0.77
CD44-203ENST00000278386 OSBPL10Q9BXB5 764 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms