RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 C1orf123Q9NWV4 160 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SDHAF2Q9NX18 166 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 BOKQ9UMX3 212 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 PUS1Q9Y606 427 aaKnown RBP eCLIP2.51□□□□□ -2.01
HERC4-201ENST00000277817 CENPVL1A0A0U1RR11 272 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR6C65A6NJZ3 312 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 NPIPB8E9PQR5 432 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PLA2G10O15496 165 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SGCEO43556 437 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 RGS11O94810 467 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SNAPINO95295 136 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 IL6RP08887 468 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 FOLR1P15328 257 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TBXA2RP21731 343 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 RFC3P40938 356 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 CYB561P49447 251 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 RPL19P84098 196 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 TGFBR3Q03167 851 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PEA15Q15121 130 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ETFDHQ16134 617 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TAF9Q16594 264 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ACSF3Q4G176 576 aaPredicted RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 ACTBL2Q562R1 376 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 FAM74A1Q5RGS3 127 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR52W1Q6IF63 320 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TEX261Q6UWH6 196 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 HAPLN4Q86UW8 402 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 NAXDQ8IW45 347 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PRSS35Q8N3Z0 413 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR2AK2Q8NG84 335 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR4D9Q8NGE8 314 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OR52N5Q8NH56 324 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 OTOSQ8NHW6 89 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 MARCH1Q8TCQ1 289 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SCARB1Q8WTV0 552 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SDSLQ96GA7 329 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ST6GAL2Q96JF0 529 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 UTP23Q9BRU9 249 aaKnown RBP2.51□□□□□ -2.01
HERC4-201ENST00000277817 C1QTNF6Q9BXI9 259 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 PBOV1Q9GZY1 135 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 MIXL1Q9H2W2 232 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 ZCCHC4Q9H5U6 513 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TAS2R5Q9NYW4 299 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 FLRT3Q9NZU0 649 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TRAPPC2LQ9UL33 140 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 TNFRSF18Q9Y5U5 241 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 R4GMQ9 66 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 U3KQ87 197 aa2.51□□□□□ -2.01
HERC4-201ENST00000277817 SPTBP11277 2137 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 FAM208BQ5VWN6 2430 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 IGKV1-8A0A0C4DH67 115 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 FAM166BA8MTA8 275 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 FAM90A26D6RGX4 464 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 IFNA1P01562 189 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MSR1P21757 451 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 S100PP25815 95 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 IL2RGP31785 369 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ALDH3B1P43353 468 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SSTP61278 116 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 GRB2P62993 217 aaKnown RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF85Q03923 595 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 FOXF1Q12946 379 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TOMM34Q15785 309 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 WDR38Q5JTN6 314 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RTL6Q6ICC9 239 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 LAIR2Q6ISS4 152 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TBC1D26Q86UD7 250 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TCTE3Q8IZS6 198 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 GCSAMQ8N6F7 178 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TEX45Q8NA69 505 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 SEMA6DQ8NFY4 1073 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR5L1Q8NGL2 311 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 FAM213BQ8TBF2 198 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 TMED6Q8WW62 240 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 C11orf40Q8WZ69 217 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MARC2Q969Z3 335 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ANKRD9Q96BM1 317 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 CMBLQ96DG6 245 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF681Q96N22 645 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 GNRHR2Q96P88 292 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR5B12Q96R08 314 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR8B4Q96RC9 309 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 ZNF2Q9BSG1 426 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 MARVELD1Q9BSK0 173 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 VN1R1Q9GZP7 353 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 UBE2ZQ9H832 354 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 EMC3Q9P0I2 261 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 OR5V1Q9UGF6 321 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 FBXO4Q9UKT5 387 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 B3GALT5Q9Y2C3 310 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 LRP12Q9Y561 859 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 CSAG2Q9Y5P2 127 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 V9GYH0 126 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 UNC13CQ8NB66 2214 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 MN1Q10571 1320 aaPredicted RBP2.5□□□□□ -2.01
HERC4-201ENST00000277817 TEX51A0A1B0GUA7 166 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 A0A1B0GUH1 482 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 RPS10-NUDT3A0A1W2PQS6 291 aa2.5□□□□□ -2.01
HERC4-201ENST00000277817 B8ZZF3 427 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms