RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RHBDL1O75783 438 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 CTSDP07339 412 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-201ENST00000276573 RPS2P15880 293 aaKnown RBP8.17□□□□□ -1.1
TRIM55-201ENST00000276573 CEACAM8P31997 349 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-201ENST00000276573 MPV17P39210 176 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 FGL1Q08830 312 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 GTF3C1Q12789 2109 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 IKZF1Q13422 519 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 IL13RA2Q14627 380 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 SLC9A3R2Q15599 337 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF474Q6S9Z5 364 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-201ENST00000276573 FAM180AQ6UWF9 173 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 UNQ6126/PRO20091Q6UXV3 157 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 Q6ZS49 121 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 WDR86Q86TI4 376 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 LINC00596Q86U02 117 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 SCCPDHQ8NBX0 429 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 PDCD10Q9BUL8 212 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 TP53TG5Q9Y2B4 290 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 SLC25A15Q9Y619 301 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 CEP250Q9BV73 2442 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 AKAP13Q12802 2813 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 CELSR3Q9NYQ7 3312 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 FXYD6-FXYD2A0A087WZ82 144 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 IGHV1-18A0A0C4DH31 117 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 LRP5LA4QPB2 252 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 K7ENP7 123 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 ARPC5O15511 151 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 NAPSAO96009 420 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 GLAP06280 429 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 HTR2BP41595 481 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 ANKRD55Q3KP44 614 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 TMEM65Q6PI78 240 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 TMUB2Q71RG4 321 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 COQ8AQ8NI60 647 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 SLX1AQ9BQ83 275 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 BCL2L14Q9BZR8 327 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 FXYD6Q9H0Q3 95 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 WDR13Q9H1Z4 485 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 SPACA1Q9HBV2 294 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 CHMP1AQ9HD42 196 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-201ENST00000276573 Q9N2K0 584 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 TMEM100Q9NV29 134 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 PURGQ9UJV8 347 aaKnown RBP8.17□□□□□ -1.1
TRIM55-201ENST00000276573 MSRB2Q9Y3D2 182 aa8.17□□□□□ -1.1
TRIM55-201ENST00000276573 IGHV2OR16-5A0A0B4J2B6 119 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 C5orf51A6NDU8 294 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 FAM25EA8MYX2 175 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 H0YL77 283 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 M0R233 179 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 KNG1P01042 644 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF728P0DKX0 622 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 SLC25A4P12235 298 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 S100A1P23297 94 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 S100A11P31949 105 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 FCGR2CP31995 323 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 SERPINF1P36955 418 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 ERVK11-1P61568 191 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 OR8G1Q15617 311 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 GSG1LQ6UXU4 331 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 C3P1Q6ZMU1 363 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF546Q86UE3 836 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 SUMF2Q8NBJ7 301 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 OR8G5Q8NG78 346 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 GTF3AQ92664 365 aaKnown RBP8.16□□□□□ -1.1
TRIM55-201ENST00000276573 ADAT1Q9BUB4 502 aaKnown RBP8.16□□□□□ -1.1
TRIM55-201ENST00000276573 RIMS4Q9H426 269 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-201ENST00000276573 IFT22Q9H7X7 185 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 RAB18Q9NP72 206 aa8.16□□□□□ -1.1
TRIM55-201ENST00000276573 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 C13orf42A0A1B0GVH6 325 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 TMEM210A6NLX4 147 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 EEF1E1-BLOC1S5C9J1V9 151 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 C3orf80F5H4A9 247 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 DEGS1O15121 323 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 GFRA3O60609 400 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF205O95201 554 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 CFDP00746 253 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-201ENST00000276573 IFNA7P01567 189 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 ACAA1P09110 424 aaPredicted RBP8.15□□□□□ -1.1
TRIM55-201ENST00000276573 GLI4P10075 376 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 RPA2P15927 270 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 KITLGP21583 273 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 FABP6P51161 128 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 UCP3P55916 312 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF718Q3SXZ3 478 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 TIMM23BQ5SRD1 257 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 C11orf87Q6NUJ2 197 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 Q6P435 159 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 SGPP2Q8IWX5 399 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 Q8IYB0 196 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 C1orf174Q8IYL3 243 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 CISD2Q8N5K1 135 aaKnown RBP8.15□□□□□ -1.1
TRIM55-201ENST00000276573 Q8NA96 180 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 NEK7Q8TDX7 302 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 PPP1R1CQ8WVI7 109 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 SFXN3Q9BWM7 321 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 MFFQ9GZY8 342 aa8.15□□□□□ -1.1
TRIM55-201ENST00000276573 PRR13Q9NZ81 148 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms