RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 HIST1H1BP16401 226 aaKnown RBP16.18■□□□□ 0.18
SSC4D-201ENST00000275560 ZNF133P52736 654 aaPredicted RBP16.18■□□□□ 0.18
SSC4D-201ENST00000275560 TMEM123Q8N131 208 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 OR14L1PQ8NHC6 308 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 SUCNR1Q9BXA5 334 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 PISDQ9UG56 409 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 ZNF587BE7ETH6 402 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 PROB1E7EW31 1015 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 M0R135 149 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 CCR5P51681 352 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 DYNLT3P51808 116 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 LSM6P62312 80 aaKnown RBP16.18■□□□□ 0.18
SSC4D-201ENST00000275560 NKX6-1P78426 367 aaPredicted RBP16.18■□□□□ 0.18
SSC4D-201ENST00000275560 ZNF799Q96GE5 643 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 ZNF385AQ96PM9 386 aaKnown RBP16.18■□□□□ 0.18
SSC4D-201ENST00000275560 PLEK2Q9NYT0 353 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 WNT16Q9UBV4 365 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 IGKV1-12A0A0C4DH73 117 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 SEC14L6B5MCN3 397 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 C10orf142B7Z368 130 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 OR2J2O76002 312 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 TMEM50AO95807 157 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 IGKV1D-12P01611 117 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 NDUFB7P17568 137 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 PTGDSP41222 190 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 HIST3H3Q16695 136 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 SSX9Q7RTT3 188 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 ODF3L1Q8IXM7 274 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 PP6455Q8WZ26 134 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 MRGPRX4Q96LA9 322 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 OXGR1Q96P68 337 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 METTL9Q9H1A3 318 aa16.18■□□□□ 0.18
SSC4D-201ENST00000275560 NAT6Q93015 286 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 FGF21Q9NSA1 209 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 FOXD3Q9UJU5 478 aaPredicted RBP16.17■□□□□ 0.18
SSC4D-201ENST00000275560 ZNF407Q9C0G0 2248 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 A0A1B0GW64 132 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 LRTM2Q8N967 370 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 SSX3Q99909 188 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 NIPSNAP3BQ9BS92 247 aa16.17■□□□□ 0.18
SSC4D-201ENST00000275560 CD63P08962 238 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 PATE4P0C8F1 98 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 MSR1P21757 451 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 PLA2G5P39877 138 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 NKX2-1P43699 371 aaPredicted RBP16.16■□□□□ 0.18
SSC4D-201ENST00000275560 ZNF154Q13106 437 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 ANKRD37Q7Z713 158 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 TMEM252Q8N6L7 170 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 NFAM1Q8NET5 270 aaPredicted RBP16.16■□□□□ 0.18
SSC4D-201ENST00000275560 TVP23CQ96ET8 276 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 NKX2-4Q9H2Z4 354 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 CALHM2Q9HA72 323 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 DMDP11532 3685 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 H3BP45 60 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 ZNHIT1O43257 154 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 GUCA1AP43080 201 aaPredicted RBP16.16■□□□□ 0.18
SSC4D-201ENST00000275560 RBP2P50120 134 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 RPL23AP62750 156 aaKnown RBP16.16■□□□□ 0.18
SSC4D-201ENST00000275560 GJC3Q8NFK1 279 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 GTF3AQ92664 365 aaKnown RBP16.16■□□□□ 0.18
SSC4D-201ENST00000275560 SNX22Q96L94 193 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 UCN2Q96RP3 112 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 UFSP2Q9NUQ7 469 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 P4HTMQ9NXG6 502 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 CLEC1BQ9P126 229 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 KIAA1456Q9P272 454 aa16.16■□□□□ 0.18
SSC4D-201ENST00000275560 A0A0U1RQV5 110 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 CA11O75493 328 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 TLE1Q04724 770 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 ARL6IP1Q15041 203 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 KCNMB1Q16558 191 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 C11orf1Q9H5F2 150 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 C3orf85A0A1B0GTC6 90 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 OR5H1A6NKK0 313 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 ADAM20O43506 726 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 PGA5P0DJD9 388 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 GLIPR1P48060 266 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 SUMO3P55854 103 aaPredicted RBP16.15■□□□□ 0.18
SSC4D-201ENST00000275560 SPIN3Q5JUX0 258 aa16.15■□□□□ 0.18
SSC4D-201ENST00000275560 IGHV1OR21-1A0A087WYE8 117 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 FUT3P21217 361 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 HERV-K104P61576 105 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 ZNF266Q14584 549 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 RTL6Q6ICC9 239 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 NABP1Q96AH0 204 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 GNG13Q9P2W3 67 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 A0A087X0M5 115 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 A0A1B0GX30 115 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 TIAF1O95411 115 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 DDTP30046 118 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 RAB11AP62491 216 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 CLDND2Q8NHS1 167 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 MOB3AQ96BX8 217 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 CRLF2Q9HC73 371 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 ST3GAL6Q9Y274 331 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 ARHGAP21Q5T5U3 1957 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 CHD3Q12873 2000 aaKnown RBP16.14■□□□□ 0.17
SSC4D-201ENST00000275560 MPPED1O15442 326 aa16.14■□□□□ 0.17
SSC4D-201ENST00000275560 PITX3O75364 302 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms