RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 NKIRAS2Q9NYR9 191 aa12.34□□□□□ -0.43
TRIM23-202ENST00000274327 COQ3Q9NZJ6 369 aa12.34□□□□□ -0.43
TRIM23-202ENST00000274327 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
TRIM23-202ENST00000274327 IL36RNQ9UBH0 155 aa12.34□□□□□ -0.43
TRIM23-202ENST00000274327 AK3Q9UIJ7 227 aa12.34□□□□□ -0.43
TRIM23-202ENST00000274327 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
TRIM23-202ENST00000274327 PGA5P0DJD9 388 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 FUT3P21217 361 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 MECP2P51608 486 aaKnown RBP12.33□□□□□ -0.44
TRIM23-202ENST00000274327 KLF3P57682 345 aaPredicted RBP12.33□□□□□ -0.44
TRIM23-202ENST00000274327 RBMS2Q15434 407 aaKnown RBP12.33□□□□□ -0.44
TRIM23-202ENST00000274327 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 FAM58AQ8N1B3 248 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 BPIFB2Q8N4F0 458 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 SPICQ8N5J4 248 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 SLC2A8Q9NY64 477 aa12.33□□□□□ -0.44
TRIM23-202ENST00000274327 FAM90A27PA6NNH2 459 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 F5H5P2 479 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 CDIPTO14735 213 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ATXN7O15265 892 aaPredicted RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 OR7C1O76099 320 aaPredicted RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 AMY2AP04746 511 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 PRKACAP17612 351 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 DNASE1P24855 282 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 CD200P41217 278 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 PDCD1Q15116 288 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 Q8IYB0 196 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 NRIP2Q9BQI9 281 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 TMPRSS13Q9BYE2 586 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 DLL4Q9NR61 685 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 MED9Q9NWA0 146 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 DUSP13Q9UII6 198 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 KIF25Q9UIL4 384 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 FLVCR2Q9UPI3 526 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 MAB21L2Q9Y586 359 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ITPR1Q14643 2758 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 DISC1C4P0D8 188 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 SMLR1H3BR10 107 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ABCD4O14678 606 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ARPC1BO15143 372 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 PTBP3O95758 552 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 GRPP07492 148 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 DTYMKP23919 212 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 HRH1P35367 487 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 SNU13P55769 128 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 MZT1Q08AG7 82 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ZMYND11Q15326 602 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 MICBQ29980 383 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 POC1AQ8NBT0 407 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 OR4K15Q8NH41 348 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 GIMAP1Q8WWP7 306 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 GTF3AQ92664 365 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 SLC6A7Q99884 636 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 SYT3Q9BQG1 590 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 MRPL37Q9BZE1 423 aaKnown RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
TRIM23-202ENST00000274327 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 NGBQ9NPG2 151 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 PLEKHA6Q9Y2H5 1048 aa12.32□□□□□ -0.44
TRIM23-202ENST00000274327 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 NKX2-6A6NCS4 301 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 ZSCAN5BA6NJL1 495 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 SNRPGP15A8MWD9 76 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 BET1O15155 118 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 SSNA1O43805 119 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 IL5P05113 134 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 BEST4Q8NFU0 473 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 CMSS1Q9BQ75 279 aaKnown RBP12.31□□□□□ -0.44
TRIM23-202ENST00000274327 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 CHST6Q9GZX3 395 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 HES4Q9HCC6 221 aa12.31□□□□□ -0.44
TRIM23-202ENST00000274327 ZNF230Q9UIE0 474 aaPredicted RBP12.31□□□□□ -0.44
TRIM23-202ENST00000274327 ERRFI1Q9UJM3 462 aaPredicted RBP12.31□□□□□ -0.44
TRIM23-202ENST00000274327 TPRP12270 2363 aaKnown RBP12.31□□□□□ -0.44
TRIM23-202ENST00000274327 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
TRIM23-202ENST00000274327 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 H3BUI4 141 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 PMP2P02689 132 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
TRIM23-202ENST00000274327 RRASP10301 218 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 AMY2BP19961 511 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 CDSNQ15517 529 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 ST3GAL2Q16842 350 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 NCMAPQ5T1S8 102 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 PRAMEF6Q5VXH4 476 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 Q6P435 159 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 OR13C8Q8NGS7 320 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 LRRC20Q8TCA0 184 aa12.3□□□□□ -0.44
TRIM23-202ENST00000274327 DYRK2Q92630 601 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms