RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RSRP1Q9BUV0 290 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 ZNF576Q9H609 170 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 OR6C3Q9NZP0 311 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 FBXL17Q9UF56 701 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 GLI4P10075 376 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 HTRA3P83110 453 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 HLA-BQ31612 363 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 ZDHHC16Q969W1 377 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 RPEQ96AT9 228 aa7.11□□□□□ -1.27
LIMD1-201ENST00000273317 CNRIP1Q96F85 164 aaPredicted RBP7.11□□□□□ -1.27
LIMD1-201ENST00000273317 PACRGQ96M98 296 aaPredicted RBP7.11□□□□□ -1.27
LIMD1-201ENST00000273317 K7ESF4 209 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 MASP2O00187 686 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 SNRPEP62304 92 aaKnown RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 INPP5JQ15735 1006 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 TMEM9BQ9NQ34 198 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 A0A1B0GTQ1 180 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 ZFPL1O95159 310 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 CEACAM3P40198 252 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 ZNF117Q03924 483 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 FOXO1Q12778 655 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 MRPL58Q14197 206 aaKnown RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 Q3ZCU0 254 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 OR10G4Q8NGN3 311 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 OR10G9Q8NGN4 311 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 OR10G7Q8NGN6 311 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 ALG1L2C9J202 215 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 PPP2CBP62714 309 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 PPP2CAP67775 309 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 BVESQ8NE79 360 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 TSPAN32Q96QS1 320 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 FOXB1Q99853 325 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 A0A1W2PPC4 97 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 CYB5R2Q6BCY4 276 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 OR2Z1Q8NG97 314 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 TMEM38BQ9NVV0 291 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 H0Y8X5 98 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 GALNSP34059 522 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 SPEM1Q8N4L4 309 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 OR2D2Q9H210 308 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 SPINK4O60575 86 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 HIST1H1EP10412 219 aaKnown RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 PCMT1P22061 227 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 SLC37A1P57057 533 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 LGALSLQ3ZCW2 172 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 OR5A2Q8NGI9 324 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 CXXC4Q9H2H0 198 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 IL36GQ9NZH8 169 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 CLEC1BQ9P126 229 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 A0A087X0M5 115 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 TRAV17A0A0B4J275 112 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 A0A1B0GX30 115 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 ANKRD20A5PA0PJZ0 165 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 EIF3IQ13347 325 aaKnown RBP7.1□□□□□ -1.27
LIMD1-201ENST00000273317 FAM27D1Q5T7N8 215 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 MRGPRX1Q96LB2 322 aa7.1□□□□□ -1.27
LIMD1-201ENST00000273317 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 TCF21O43680 179 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 CEACAM5P06731 702 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 KLF3P57682 345 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 UBE2L3P68036 154 aaKnown RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 ACSM6Q6P461 480 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 VASH2Q86V25 355 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 OR10A7Q8NGE5 316 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 ASB10Q8WXI3 467 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 C20orf141Q9NUB4 165 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 OOEPA6NGQ2 149 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 FAM78BQ5VT40 261 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PLEKHB1Q9UF11 243 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 ALPK2Q86TB3 2170 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 EPPINO95925 133 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 NGFP01138 241 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PGA4P0DJD7 388 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PGA5P0DJD9 388 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 RAE1P78406 368 aaKnown RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 HFEQ30201 348 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 AWAT1Q58HT5 328 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 C8orf44Q96CB5 159 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 SLC25A22Q9H936 323 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 IGHV3-15A0A0B4J1V0 119 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 OR5AC1P0C628 307 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 FAM87AP0C7U9 286 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 SULT1A1P50225 295 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 OR6X1Q8NH79 312 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 C1QTNF6Q9BXI9 259 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 FAM117AQ9C073 453 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 ING1Q9UK53 422 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PRRT4C9JH25 899 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 F5H697 171 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PLPP3O14495 311 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PITX3O75364 302 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 CXorf1O96002 111 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 NEURL2Q9BR09 285 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 TNFRSF12AQ9NP84 129 aa7.09□□□□□ -1.27
LIMD1-201ENST00000273317 PRNDQ9UKY0 176 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms