RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PRKACAP17612 351 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 TBR1Q16650 682 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 SLC22A25Q6T423 547 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 TEX261Q6UWH6 196 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 CLEC18BQ6UXF7 455 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 Q6ZS49 121 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 Q8NA96 180 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 AMDHD2Q9Y303 409 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 MSRB2Q9Y3D2 182 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 U3KQ87 197 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 RFPL4AA6NLU0 287 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 RFPL4AL1F8VTS6 287 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 NAPSAO96009 420 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 CEACAM8P31997 349 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-201ENST00000269318 TDGF1P3P51864 188 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 SORDQ00796 357 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 IL13RA2Q14627 380 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 ADAT1Q9BUB4 502 aaKnown RBP14.16□□□□□ -0.14
CCDC40-201ENST00000269318 RHOFQ9HBH0 211 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 DMXL2Q8TDJ6 3036 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 TUBG1P23258 451 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 DUSP1P28562 367 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 IKZF1Q13422 519 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 SRSF7Q16629 238 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCDC40-201ENST00000269318 C3P1Q6ZMU1 363 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 KCTD9Q7L273 389 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 FAM58AQ8N1B3 248 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 OR8H1Q8NGG4 311 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 LILRB4Q8NHJ6 448 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 DHRS9Q9BPW9 319 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 TUBG2Q9NRH3 451 aa14.16□□□□□ -0.14
CCDC40-201ENST00000269318 SPTBN2O15020 2390 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 SVILO95425 2214 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 IGHV2OR16-5A0A0B4J2B6 119 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 CTSDP07339 412 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-201ENST00000269318 HOXD4P09016 255 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-201ENST00000269318 PGAM2P15259 253 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 SLC9A3R2Q15599 337 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 UNQ6126/PRO20091Q6UXV3 157 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 SCCPDHQ8NBX0 429 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF680Q8NEM1 530 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 FAM210AQ96ND0 272 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 SFXN3Q9BWM7 321 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 WDR13Q9H1Z4 485 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 IFT22Q9H7X7 185 aa14.15□□□□□ -0.14
CCDC40-201ENST00000269318 PURGQ9UJV8 347 aaKnown RBP14.15□□□□□ -0.14
CCDC40-201ENST00000269318 C14orf166Q9Y224 244 aaKnown RBP14.15□□□□□ -0.14
CCDC40-201ENST00000269318 FXYD6-FXYD2A0A087WZ82 144 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 C3orf80F5H4A9 247 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 L7N2F9 121 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 ARPC5O15511 151 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 GMFBP60983 142 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 ERVK11-1P61568 191 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF154Q13106 437 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 OPCMLQ14982 345 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 ANKRD55Q3KP44 614 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 SEC22AQ96IW7 307 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 SLX1AQ9BQ83 275 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 BCL2L14Q9BZR8 327 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 FXYD6Q9H0Q3 95 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 SPACA1Q9HBV2 294 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 Q9N2K0 584 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 TRAV24A0A0B4J272 114 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 H0YL77 283 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 M0R233 179 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 MLNRO43193 412 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 NOS1APO75052 506 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-201ENST00000269318 ZNF205O95201 554 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 GLI4P10075 376 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 KITLGP21583 273 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 HTR2BP41595 481 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 FGL1Q08830 312 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 SUMF2Q8NBJ7 301 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 OR8G5Q8NG78 346 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 GTF3AQ92664 365 aaKnown RBP14.14□□□□□ -0.15
CCDC40-201ENST00000269318 PDCD10Q9BUL8 212 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 DPCDQ9BVM2 203 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-201ENST00000269318 CLEC4MQ9H2X3 399 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-201ENST00000269318 CHMP1AQ9HD42 196 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-201ENST00000269318 POLDIP2Q9Y2S7 368 aa14.14□□□□□ -0.15
CCDC40-201ENST00000269318 DSPP15924 2871 aaKnown RBP14.14□□□□□ -0.15
CCDC40-201ENST00000269318 ESPL1Q14674 2120 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 TMEM210A6NLX4 147 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 KNG1P01042 644 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 FCGR2CP31995 323 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 OR8G1Q15617 311 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 TIMM23BQ5SRD1 257 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 COQ8AQ8NI60 647 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 S100PBPQ96BU1 408 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 NRIP2Q9BQI9 281 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 TMEM100Q9NV29 134 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 PRR13Q9NZ81 148 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 ATMQ13315 3056 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 HSPB6O14558 160 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 GLAP06280 429 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 PGA5P0DJD9 388 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 RPA2P15927 270 aa14.13□□□□□ -0.15
CCDC40-201ENST00000269318 C4BPBP20851 252 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms