RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 E5RGE8 158 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 TP53I11O14683 189 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 S100A9P06702 114 aaKnown RBP14.53□□□□□ -0.08
SQLE-201ENST00000265896 SCTP09683 121 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 CHATP28329 748 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 H3F3AP84243 136 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 PSG4Q00888 419 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 TMEM171Q8WVE6 324 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 TM2D1Q9BX74 207 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 SLC7A10Q9NS82 523 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 LUZP4Q9P127 313 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 MIOXQ9UGB7 285 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 NSG2Q9Y328 171 aa14.53□□□□□ -0.08
SQLE-201ENST00000265896 UBE2J1Q9Y385 318 aaPredicted RBP14.53□□□□□ -0.08
SQLE-201ENST00000265896 DANCRP0C864 163 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 RAB5AP20339 215 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 ZNF84P51523 738 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 SUCLG1P53597 346 aaKnown RBP14.52□□□□□ -0.08
SQLE-201ENST00000265896 FOXG1P55316 489 aaPredicted RBP14.52□□□□□ -0.08
SQLE-201ENST00000265896 OSR2Q8N2R0 312 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 DMBX1Q8NFW5 382 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 CADM4Q8NFZ8 388 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 BCL2L14Q9BZR8 327 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 GSN-AS1Q9NRJ2 163 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 TUBD1Q9UJT1 453 aa14.52□□□□□ -0.08
SQLE-201ENST00000265896 BORCS7-ASMTA0A0B4J1R7 106 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 IGSF23A1L1A6 192 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 ST8SIA3O43173 380 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 LSM6P62312 80 aaKnown RBP14.52□□□□□ -0.09
SQLE-201ENST00000265896 PCOLCEQ15113 449 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 SLC25A53Q5H9E4 307 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 ACER2Q5QJU3 275 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 SLC16A14Q7RTX9 510 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 UBAC2Q8NBM4 344 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 MSI2Q96DH6 328 aaKnown RBP14.52□□□□□ -0.09
SQLE-201ENST00000265896 STARD10Q9Y365 291 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 KPTNQ9Y664 436 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 ADAM20O43506 726 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 EWSR1Q01844 656 aaKnown RBP eCLIP14.52□□□□□ -0.09
SQLE-201ENST00000265896 HLA-BQ31612 363 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 LIAT1Q6ZQX7 453 aa14.52□□□□□ -0.09
SQLE-201ENST00000265896 A0A0U1RQV5 110 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 C5orf52A6NGY3 159 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 ZNF724A8MTY0 619 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 TERTO14746 1132 aaKnown RBP14.51□□□□□ -0.09
SQLE-201ENST00000265896 CLN5O75503 358 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 ATP6V0CP27449 155 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 OTX2P32243 289 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 LPAL2Q16609 132 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 FAM209BQ5JX69 171 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 ZNF611Q8N823 705 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 FADS6Q8N9I5 356 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 OR5C1Q8NGR4 320 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 OR1F12Q8NHA8 337 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 SCRT1Q9BWW7 348 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 SMOC1Q9H4F8 434 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 IGKV1D-13A0A0B4J2D9 117 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 UMODP07911 640 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 OR8U8P0C7N1 319 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 IGKV1-13P0DP09 117 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 LIFP15018 202 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 GNRHRP30968 328 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 FAM3AP98173 230 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 ZNF154Q13106 437 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 C4orf17Q53FE4 359 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 SOHLH1Q5JUK2 328 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 ZNF385CQ66K41 422 aaPredicted RBP14.51□□□□□ -0.09
SQLE-201ENST00000265896 OR51H1Q8NH63 302 aa14.51□□□□□ -0.09
SQLE-201ENST00000265896 TMEM50AO95807 157 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 HLA-HP01893 362 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 EIF1P41567 113 aaKnown RBP14.5□□□□□ -0.09
SQLE-201ENST00000265896 GPM6AP51674 278 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 IL1F10Q8WWZ1 152 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 DOCK11Q5JSL3 2073 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 HS3ST1O14792 307 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 IGLV3-1P01715 115 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 P2RY1P47900 373 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 HOXA4Q00056 320 aaPredicted RBP14.5□□□□□ -0.09
SQLE-201ENST00000265896 GNMTQ14749 295 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 C9orf152Q5JTZ5 239 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 AAED1Q7RTV5 226 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 TBC1D26Q86UD7 250 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 SKA3Q8IX90 412 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 GAPTQ8N292 157 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 SUMF2Q8NBJ7 301 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 HPSE2Q8WWQ2 592 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 HS3ST3B1Q9Y662 390 aa14.5□□□□□ -0.09
SQLE-201ENST00000265896 LY6G6EA0A0G2JKS1 128 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 PQLC2LA1A4F0 135 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 ETV2O00321 342 aaPredicted RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 OR2C1O95371 312 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 PPYP01298 95 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 HEXAP06865 529 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 ZNF133P52736 654 aaPredicted RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 CARD18P57730 90 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 RPS16P62249 146 aaKnown RBP14.49□□□□□ -0.09
SQLE-201ENST00000265896 KCNMB1Q16558 191 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 ZNF695Q8IW36 515 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 GPR137CQ8N3F9 429 aa14.49□□□□□ -0.09
SQLE-201ENST00000265896 C15orf54Q8N8G6 183 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms