RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ACTC1P68032 377 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ACTA1P68133 377 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ZNF91Q05481 1191 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 PDZK1IP1Q13113 114 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 CNN3Q15417 329 aaKnown RBP7.85□□□□□ -1.15
VPS41-201ENST00000265745 GRK1Q15835 563 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 SSX2Q16385 188 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ZIK1Q3SY52 487 aaPredicted RBP7.85□□□□□ -1.15
VPS41-201ENST00000265745 Q8N2B8 174 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ACBD7Q8N6N7 88 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 TPRX1Q8N7U7 411 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 DTX3Q8N9I9 347 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 OR4S1Q8NGB4 309 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 OR2T6Q8NHC8 308 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 EMG1Q92979 244 aaKnown RBP7.85□□□□□ -1.15
VPS41-201ENST00000265745 SPSB1Q96BD6 273 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 FOXRED1Q96CU9 486 aaPredicted RBP7.85□□□□□ -1.15
VPS41-201ENST00000265745 CCDC140Q96MF4 163 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ZNF714Q96N38 554 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 CHST6Q9GZX3 395 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 FOXJ3Q9UPW0 622 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 EXOGQ9Y2C4 368 aaKnown RBP7.85□□□□□ -1.15
VPS41-201ENST00000265745 LINC00312Q9Y6C7 94 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 IGKV1-12A0A0C4DH73 117 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 A6NDX4 124 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 OR4C45A6NMZ5 311 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 J3QLW9 94 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 CYB5AP00167 134 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 IGKV1D-12P01611 117 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 MT-ND2P03891 347 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 CALCBP10092 127 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ZNF19P17023 458 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ZNF20P17024 532 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 GABRB1P18505 474 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 AZGP1P25311 298 aaKnown RBP7.84□□□□□ -1.15
VPS41-201ENST00000265745 ERP29P30040 261 aaKnown RBP7.84□□□□□ -1.15
VPS41-201ENST00000265745 ECI1P42126 302 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 DYNLT3P51808 116 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ACTA2P62736 377 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ACTG2P63267 376 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 DYNC1I2Q13409 638 aaKnown RBP7.84□□□□□ -1.15
VPS41-201ENST00000265745 EDDM3AQ14507 147 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 KPNB1Q14974 876 aaKnown RBP7.84□□□□□ -1.15
VPS41-201ENST00000265745 FAM189A2Q15884 450 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 PLA1AQ53H76 456 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 SPIN3Q5JUX0 258 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 Q6ZS46 218 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 LHFPL2Q6ZUX7 228 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 RNF144BQ7Z419 303 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 CBR4Q8N4T8 237 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 KLHDC1Q8N7A1 406 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 OR51A4Q8NGJ6 313 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 OR10AC1Q8NH08 325 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 LGALS12Q96DT0 336 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 PELI1Q96FA3 418 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 OPALINQ96PE5 141 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ZNF702PQ9H963 129 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 HMG20AQ9NP66 347 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ABCB10Q9NRK6 738 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 PRR13Q9NZ81 148 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 AASSQ9UDR5 926 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 GLS2Q9UI32 602 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 HHLA2Q9UM44 414 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 TCF19Q9Y242 345 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 ORC6Q9Y5N6 252 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 SESN1Q9Y6P5 492 aa7.84□□□□□ -1.15
VPS41-201ENST00000265745 IGHV2-26A0A0B4J1V2 119 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 SNTNA6NMZ2 147 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 SH2D1BO14796 132 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 MGST3O14880 152 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 MMP23AO75900 390 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 KDM4BO94953 1096 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 HTR1AP08908 422 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 VSIG10L2P0DP72 767 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 PRKACAP17612 351 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 LMO1P25800 156 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 OR3A1P47881 315 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 P2RX3P56373 397 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 ALKBH1Q13686 389 aaKnown RBP7.83□□□□□ -1.16
VPS41-201ENST00000265745 GALEQ14376 348 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 HABP2Q14520 560 aaPredicted RBP7.83□□□□□ -1.16
VPS41-201ENST00000265745 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 HIST2H2BDQ6DRA6 164 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 ZFP1Q6P2D0 407 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 LHFPL3Q86UP9 236 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 ZNF676Q8N7Q3 588 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 C11orf44Q8N8P7 122 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 RHOXF1Q8NHV9 184 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 RPS4Y2Q8TD47 263 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 RFT1Q96AA3 541 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 C4orf36Q96KX1 117 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 NKX3-1Q99801 234 aaPredicted RBP7.83□□□□□ -1.16
VPS41-201ENST00000265745 ZNF649Q9BS31 505 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 TMEM133Q9H2Q1 129 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 SERTAD4Q9NUC0 356 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 MYRFQ9Y2G1 1151 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 GSTK1Q9Y2Q3 226 aa7.83□□□□□ -1.16
VPS41-201ENST00000265745 UBE2J1Q9Y385 318 aaPredicted RBP7.83□□□□□ -1.16
VPS41-201ENST00000265745 HILPDAQ9Y5L2 63 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms