RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SP6Q3SY56 376 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 HLA-DQA1Q5Y7H0 255 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 FAM90A2PQ658T7 463 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 ANGPTL4Q9BY76 406 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 CTDSP1Q9GZU7 261 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 CHST11Q9NPF2 352 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 FAM206AQ9NX38 181 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 TMEM131Q92545 1883 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 LOC102723971A0A1B0GUV8 181 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 FAM221AA4D161 298 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 ZNF878C9JN71 531 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 ETV2O00321 342 aaPredicted RBP11.45□□□□□ -0.58
NUP54-201ENST00000264883 SIAH2O43255 324 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 HSPA12AO43301 675 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 TSPAN2O60636 221 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 SFTPDP35247 375 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 OR3A4PP47883 348 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 VAMP2P63027 116 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 LYZL2Q7Z4W2 148 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 FBXL14Q8N1E6 418 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 OR52M1Q8NGK5 317 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 REEP6Q96HR9 211 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 FOXQ1Q9C009 403 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 VN1R1Q9GZP7 353 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 CHRNA10Q9GZZ6 450 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 PNO1Q9NRX1 252 aaKnown RBP11.45□□□□□ -0.58
NUP54-201ENST00000264883 P4HTMQ9NXG6 502 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 LNP1A1A4G5 178 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 HBE1P02100 147 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 DUSP1P28562 367 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 CSNK1A1P48729 337 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 ZFP36L1Q07352 338 aaKnown RBP11.44□□□□□ -0.58
NUP54-201ENST00000264883 LINC00346Q8IVM7 164 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 TMEM123Q8N131 208 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 OR2AJ1Q8NGZ0 328 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 ASB10Q8WXI3 467 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 TMEM234Q8WY98 164 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 BOD1Q96IK1 185 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 MRGPRX4Q96LA9 322 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 C1orf147Q96MC9 270 aaPredicted RBP11.44□□□□□ -0.58
NUP54-201ENST00000264883 SDF2L1Q9HCN8 221 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 CENPMQ9NSP4 180 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 LAMP3Q9UQV4 416 aa11.44□□□□□ -0.58
NUP54-201ENST00000264883 COL5A1P20908 1838 aaPredicted RBP11.44□□□□□ -0.58
NUP54-201ENST00000264883 NPIPA5E9PKD4 350 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 SEMA4FO95754 770 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 TTRP02766 147 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 DBHP09172 617 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 CTSEP14091 401 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 MMP9P14780 707 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 SELEP16581 610 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 TUBG1P23258 451 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 CD82P27701 267 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 OR10J1P30954 320 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 OR5I1Q13606 314 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 GNMTQ14749 295 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 AARDQ4LEZ3 155 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 FBXW9Q5XUX1 488 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 WDR25Q64LD2 544 aaPredicted RBP11.43□□□□□ -0.58
NUP54-201ENST00000264883 POMZP3Q6PJE2 187 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 OR13H1Q8NG92 308 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 ZNF721Q8TF20 911 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 DAZLQ92904 295 aaKnown RBP11.43□□□□□ -0.58
NUP54-201ENST00000264883 CALHM2Q9HA72 323 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 LANCL2Q9NS86 450 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 LRFN1Q9P244 771 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 NAGKQ9UJ70 344 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 NPIPA1Q9UND3 350 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 SLC7A11Q9UPY5 501 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 ARID1BQ8NFD5 2236 aaPredicted RBP11.43□□□□□ -0.58
NUP54-201ENST00000264883 FAM24AA6NFZ4 105 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 HPRT1P00492 218 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 IGHV4-34P06331 123 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 ZNF20P17024 532 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 BLKP51451 505 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 PIGPP57054 158 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 PLCXD2Q0VAA5 305 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 TMEM187Q14656 261 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 TMEM170AQ8WVE7 144 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 KCNK17Q96T54 332 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 OR10A2Q9H208 303 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 PARD6AQ9NPB6 346 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 GNG13Q9P2W3 67 aa11.43□□□□□ -0.58
NUP54-201ENST00000264883 IGKV3D-11A0A0A0MRZ8 115 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 TRDCB7Z8K6 153 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 PITX3O75364 302 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 DDAH2O95865 285 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 CD55P08174 381 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 CAPZBP47756 277 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 IDH3GP51553 393 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 RBX1P62877 108 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 ARL6IP1Q15041 203 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 RTL6Q6ICC9 239 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 CMTM1Q8IZ96 169 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 SLC22A18ASQ8N1D0 253 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 OR2C3Q8N628 320 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 OR51T1Q8NGJ9 327 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 GPR119Q8TDV5 335 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 C22orf15Q8WYQ4 148 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms